A free, open-source, globally available tool for DNA sequence screening
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May 5, 2026 - Python
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biosecurity
Here are 26 public repositories matching this topic...
Implementation of FoldMark: Safeguarding Protein Structure Generative Models with Distributional and Evolutionary Watermarking
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Apr 19, 2026 - Python
Injecting watermarks to protein sequences for privacy protection in biosecurity
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Oct 1, 2024 - Jupyter Notebook
Reference-free, privacy-preserving wastewater pathogen surveillance for federated hospital networks. DNABERT-2 embeddings + Transformer-encoder VAE detect emerging anomaly clusters in unclassified reads. AIxBio Hackathon Track 2, Apart Research.
bioinformatics deep-learning metagenomics public-health anomaly-detection variational-autoencoder hackathon-project federated-learning pathogen-detection biosecurity wastewater-surveillance pandemic-preparedness dnabert aixbio
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Apr 29, 2026 - Jupyter Notebook
Fast multi-threaded sequence filtration using k-mers
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Mar 30, 2026 - Rust
A Progressive Web App for biosecurity management in cattle & poultry farms. Features risk assessment, disease alerts, multilingual support (Hindi/English), and offline functionality. Built for Ministry of Fisheries Hackathon.
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Jan 2, 2026 - JavaScript
A data science platform for various problems in coronavirus research.
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May 1, 2026 - Python
CRC-Screen: Certified DNA-Synthesis Hazard Screening Under Taxonomic Shift
ai-safety conformal-prediction biosecurity dna-screening llm-as-judge calibrated-classification conformal-risk-control
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May 4, 2026 - Python
One Health risk and policy modelling framework in R
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Apr 8, 2026 - R
Project MOSAIC provides an open-source, Protein-Aware Mock Screener tool designed to defend against "context-scrubbed" multi-agent LLM workflows.
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Apr 27, 2026 - Python
Farm Stochastic Risk Analysis
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Jan 21, 2026 - R
Biosecurity sterilization calculator for autoclave cycles. Ensures compliance with CDC and local health department sterilization protocols.
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Feb 7, 2026 - HTML
Pre-etiologic zoonotic-spillover risk forecasting at 25 km tile resolution. Methodology, 25-event validation cohort, 8-layer governance framework, MCP server source, regulatory pathway. Aqta Technologies Limited (Dublin).
mcp fhir public-health xgboost epidemiology shap one-health biosecurity ai-governance pandemic-preparedness early-warning zoonotic-spillover
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Apr 30, 2026 - Python
A deterministic, fail-closed cryptographic firewall for AI-controlled labs that prevents dangerous hallucinations and prompt injections by validating DNA, peptide, and chemical synthesis requests through Ed25519 signatures, PCA-chain authority narrowing, and rigorous biological invariant screening.
rust cryptography bioinformatics synthetic-biology ed25519 protein-design ai-safety cyber-physical-systems hardware-security chemical-synthesis biosecurity llm-security biosafety fail-closed prompt-injection-defense adversarial-testing dna-synthesis deterministic-validation laboratory-auto research-security
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May 3, 2026 - Rust
SeqScreen wrapper exposing the biosurveillance pipeline as MCP tools. Built for the Apart AI × Biosecurity Hackathon, April 2026.
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Apr 25, 2026 - HTML
Fruit fly introduction risk dashboard for USDA APHIS PPQ. Dual frontend: Leaflet.js geospatial dashboard + Streamlit analytics platform (Poisson GLM, Pseudo-R² 0.68). Covers 6 invasive species across air passenger & cargo pathways. USDA × CSU Hackathon 2026.
python agriculture hackathon leaflet geospatial invasive-species usda poisson-regression streamlit risk-modeling biosecurity fruit-fly aphis phytosanitary
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Apr 30, 2026 - Python
Mapping the distribution of high-containment laboratories and projected climate-related hazards
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Nov 21, 2025 - HTML
🧬🛡️ Function-aware DNA synthesis screening against AI-designed biological threats | ESM-2 3B + contrastive learning | AUROC 0.998 | 99.3% detection at <40% identity
machine-learning bioinformatics pytorch fastapi contrastive-learning biosecurity protein-language-model dna-screening esm2
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Apr 25, 2026 - Python
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Apr 27, 2026 - Python
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