justanatomy (nbdev)

A tiny, notebook-first Python SDK for exploring human anatomy parts from a local dataset index.

Install

pip install -e ".[dev]"

Optional 3D rendering:

pip install -e ".[mesh]"

Quickstart

from justanatomy import Atlas

atlas = Atlas()
atlas.ensure_downloaded()   # downloads BodyParts3D-derived repo zip
atlas.ensure_index()        # builds index.json from FMA mapping + stl/png files

atlas.search("femur", k=5)
atlas.show_image("FMA24474")      # static
atlas.show_mesh("FMA24474")       # 3D (after installing [mesh])

Dataset

By default, Atlas.ensure_downloaded() fetches a GitHub zip of a BodyParts3D-derived repository that contains stl/, png/, and FMA_ID_label_obj.csv.

• Mesh filenames follow FMA<FMAID>.stl
• Mapping CSV includes FMAID, preferredName