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- ipcr Public
Fast in-silico PCR toolkit for primer/probe-supported amplicon discovery with IUPAC-aware matching and thermodynamic ranking.
KPU-AGC/ipcr’s past year of commit activity - bulk-segregant-analysis Public
Reproducible bulk segregant analysis pipeline for mapping trait-associated genomic regions from pooled sequencing data using ΔAF/G′ statistics, null simulation, peak calling, and annotation.
KPU-AGC/bulk-segregant-analysis’s past year of commit activity - general-resources Public
Kwantlen Polytechnic University Applied Genomics Lab scripts for handling sequence data
KPU-AGC/general-resources’s past year of commit activity - z-drive-backup Public
A python script to facilitate the process of copying files to the Z-drive for archiving.
KPU-AGC/z-drive-backup’s past year of commit activity - ddRAD-seq Public
A repository for performing double-digest Restriction Associated DNA sequencing (ddRAD-seq) for reduced representation sequencing.
KPU-AGC/ddRAD-seq’s past year of commit activity - genome-slicer Public archive
A Python wrapper for extracting similar sequences from multiple genomes using BLAST.
KPU-AGC/genome-slicer’s past year of commit activity - py-simRAD Public archive
An implementation of simRAD in Python using BioPython for simulated prediction of loci expected in RADseq.
KPU-AGC/py-simRAD’s past year of commit activity
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