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Task: Pytests should not create files

infrastructure

tests

Status: Open.

#816 In tanghaibao/jcvi;

· Adamtaranto opened on Jan 28, 2026

Tracking one gene throughout different genomes

Status: Open.

#811 In tanghaibao/jcvi;

· rsandean opened on Dec 19, 2025

Identifying true inversions

Status: Open.

#808 In tanghaibao/jcvi;

· Ruth-Moraa opened on Dec 15, 2025

jcvi.compara.catalog out of memory

Status: Open.

#803 In tanghaibao/jcvi;

· Tong-Chen opened on Nov 20, 2025

jcvi.graphics.karyotype seqids layout: IDs can not found in bed files

Status: Open.

#788 In tanghaibao/jcvi;

· 247nahid opened on Jun 18, 2025

Chromosome label too close to the chromosome plot.

graphics

Status: Open.

#774 In tanghaibao/jcvi;

· GurjotSinghSidhu opened on Apr 22, 2025

AttributeError: 'LayoutLine' object has no attribute 'sizes'

input format error

Status: Open.

#771 In tanghaibao/jcvi;

· Dengdengdeng-lab opened on Apr 22, 2025

Issue with Merging Multi-Species Seqids for JCVI Karyotype – IndexError: list index out of range Message

graphics

Status: Open.

#769 In tanghaibao/jcvi;

· SoledadPianist opened on Apr 20, 2025

"Anchors File Generated in Ortholog Mode Only Contains Three Columns, Preventing Downstream Visualization"

graphics

Status: Open.

#768 In tanghaibao/jcvi;

· SoledadPianist opened on Apr 11, 2025

Issue with Chromosome ID Display in Karyotype Plots

graphics

Status: Open.

#766 In tanghaibao/jcvi;

· SoledadPianist opened on Apr 9, 2025

Optimise Synteny Layout

help needed

new feature

Status: Open.

#751 In tanghaibao/jcvi;

· Adamtaranto opened on Feb 26, 2025

Add format tests for synteny Layout

tests

Status: Open.

#720 In tanghaibao/jcvi;

· Adamtaranto opened on Nov 26, 2024