Skip to content

princello/Extensions-of-Fisher-s-method

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

15 Commits
 
 
 
 

Repository files navigation

Extensions-of-Fisher-s-method

In statistics, extensions of Fisher's method are a group of approaches that allow approximately valid statistical inferences to be made when the assumptions required for the direct application of Fisher's method are not valid. Fisher's method is a way of combining the information in the p-values from different statistical tests so as to form a single overall test: this method requires that the individual test statistics (or, more immediately, their resulting p-values) should be statistically independent.(ref:https://en.wikipedia.org/wiki/Extensions_of_Fisher%27s_method)

Fish’s method with weight and under statistics dependence condition

Usage

import efm

f = efm.model(p,w,c) #Initialize Fish’s method

f.org() #Application to independent test statistics

f.dep() #Extension to dependent test statistics

f.wei() #Extension to weighted test statistics

f.depwei() #Extension to dependent and weighted test statistics

Method

Defining the statistic that followed a chi-squared distribution with 2 degrees of freedom,

image

When introducing weight(w), the overall p-value corresponding T-statistic followed a chi-squared distribution with 2n degrees of freedom and can be approximated by scaled chi-squared distribution,

image

Considering statistics aren't independent, when estimating the parameters, the covariance matrix can be expressed as[1],

image

where

image

and

image

Rho hat is the Pearson correlation coefficient between test statistics

Using the method of moments, the parameters can be estimated as,

image

image

[1] Yang, J.J. Distribution of fisher's combination statistic when the tests are dependent. J Stat Comput Sim 2010, 80, 1-12.

About

In statistics, extensions of Fisher's method are a group of approaches that allow approximately valid statistical inferences to be made when the assumptions required for the direct application of Fisher's method are not valid. Fisher's method is a way of combining the information in the p-values from different statistical tests so as to form a s…

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

 
 
 

Contributors

Languages