Repositories list

• gut-to-soil-tutorial

  Public
  The gut-to-soil axis microbiome analysis tutorial

  Makefile

  •4•1•4•2•Updated Mar 11, 2026Mar 11, 2026

• q2-composition

  Public
  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •29•6•7•1•Updated Mar 11, 2026Mar 11, 2026

• q2-feature-table

  Public

  qiime2/q2-feature-table’s past year of commit activity
  QIIME 2 plugin supporting operations on feature tables.

  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •41•2•20•1•Updated Mar 11, 2026Mar 11, 2026

• distributions

  Public
  Makefile

  •

  BSD 3-Clause "New" or "Revised" License

  •11•5•6•10•Updated Mar 11, 2026Mar 11, 2026

• library

  Public
  A website for sharing QIIME 2 Plugins

  Svelte

  •

  BSD 3-Clause "New" or "Revised" License

  •2•0•4•1•Updated Mar 11, 2026Mar 11, 2026

• q2-diversity

  Public
  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •44•3•46•3•Updated Mar 10, 2026Mar 10, 2026

• q2templates

  Public
  Design template package for QIIME 2 Plugins

  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •15•4•0•0•Updated Mar 10, 2026Mar 10, 2026

• q2view

  Public
  A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations

  TypeScript

  •

  BSD 3-Clause "New" or "Revised" License

  •3•1•2•1•Updated Mar 9, 2026Mar 9, 2026

• discourse-unhandled-tagger

  Public
  Simple plugin that tags topics automatically if non-staff replies

  Ruby

  •

  MIT License

  •6•0•0•0•Updated Mar 9, 2026Mar 9, 2026

• q2-vizard

  Public
  The first choice of wizard lizards for interactive, generalized microbiome data visualization!

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •13•1•8•3•Updated Mar 6, 2026Mar 6, 2026

• q2-longitudinal

  Public
  QIIME 2 plugin for paired sample comparisons

  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •17•9•28•2•Updated Mar 6, 2026Mar 6, 2026

• action-library-packaging

  Public
  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •5•0•0•1•Updated Mar 6, 2026Mar 6, 2026

• q2cli

  Public
  Command line interface for QIIME 2

  hacktoberfestq2interface

  hacktoberfestq2interface

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •30•19•11•1•Updated Mar 5, 2026Mar 5, 2026

• q2-diversity-lib

  Public
  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •14•0•6•0•Updated Mar 5, 2026Mar 5, 2026

• q2-sample-classifier

  Public
  QIIME 2 plugin for machine learning prediction of sample data.

  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •34•6•15•0•Updated Mar 5, 2026Mar 5, 2026

• amplicon-docs

  Public
  Source for QIIME 2 amplicon documentation.

  Makefile

  •2•1•6•1•Updated Mar 4, 2026Mar 4, 2026

• q2

  Public
  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Mar 4, 2026Mar 4, 2026

• library-catalog

  Public

  qiime2/library-catalog’s past year of commit activity
  Stores a list of the repos that are included in the QIIME 2 library

  BSD 3-Clause "New" or "Revised" License

  •10•0•1•1•Updated Mar 3, 2026Mar 3, 2026

• q2-vsearch

  Public
  vsearch plugin for QIIME 2

  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •21•6•8•0•Updated Feb 27, 2026Feb 27, 2026

• q2-types

  Public
  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •45•17•27•2•Updated Feb 26, 2026Feb 26, 2026

• static-site-infrastructure

  Public
  Dockerfile

  •

  BSD 3-Clause "New" or "Revised" License

  •3•0•3•0•Updated Feb 23, 2026Feb 23, 2026

• homepage

  Public

  qiime2/homepage’s past year of commit activity
  QIIME 2 Homepage

  Astro

  •

  MIT License

  •0•0•0•0•Updated Feb 18, 2026Feb 18, 2026

• q2-alignment

  Public
  Support for multiple sequence alignment in QIIME 2.

  hacktoberfest

  hacktoberfest

  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •23•2•6•1•Updated Feb 5, 2026Feb 5, 2026

• moving-pictures-tutorial

  Public
  Moving Pictures Tutorial source

  Makefile

  •1•0•1•0•Updated Feb 4, 2026Feb 4, 2026

• galaxy-tools

  Public
  Official QIIME 2 tools for Galaxy

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •5•1•12•3•Updated Jan 28, 2026Jan 28, 2026

• q2-demux

  Public
  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •22•1•9•1•Updated Jan 27, 2026Jan 27, 2026

• q2-emperor

  Public
  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •21•1•4•0•Updated Jan 27, 2026Jan 27, 2026

• q2-deblur

  Public
  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •20•4•7•1•Updated Jan 27, 2026Jan 27, 2026

• q2-quality-filter

  Public
  Quality filtering for QIIME2

  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •14•1•3•0•Updated Jan 27, 2026Jan 27, 2026

• q2-mystery-stew

  Public
  This plugin exists to define integration tests between interfaces and the framework.

  hacktoberfest

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •6•0•0•0•Updated Jan 27, 2026Jan 27, 2026