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    48 repositories

    • git-worktree-tools

      Public
      Git worktree workflow tools: create PRs, manage worktrees, sync configs. Cross-platform CLI for Windows, macOS, and Linux.
      TypeScript
      •
      MIT License
      •1•0•0•1•Updated Mar 1, 2026Mar 1, 2026

    • solesR

      Public
      Public facing R package for SOLES (Systematic Online Living Evidence Summary) Development
      r-packageevidence-synthesis
      r-packageevidence-synthesis
      R
      •
      GNU Affero General Public License v3.0
      •2•6•20•4•Updated Feb 25, 2026Feb 25, 2026

    • irise_pm_handbook

      Public
      TeX
      •0•0•0•0•Updated Feb 22, 2026Feb 22, 2026

    • ASySD

      Public
      HTML
      •
      GNU General Public License v3.0
      •6•18•20•0•Updated Jan 13, 2026Jan 13, 2026

    • NDC-SOLES

      Public
      Development, workflow, and app code for NDC-SOLES project.
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Oct 24, 2025Oct 24, 2025

    • arrnc-deployment-template

      Public
      HTML
      •0•1•0•0•Updated Oct 23, 2025Oct 23, 2025

    • iRISE-SOLES

      Public
      HTML
      •0•0•4•0•Updated Oct 9, 2025Oct 9, 2025

    • soles-projects

      Public
      Jekyll theme based on Freelancer Start Bootstrap theme
      JavaScript
      •
      MIT License
      •2.7k•0•0•0•Updated Oct 7, 2025Oct 7, 2025

    • syrf_userguide_jekyll

      Public
      SCSS
      •
      Creative Commons Attribution 4.0 International
      •1•0•0•2•Updated Jul 30, 2025Jul 30, 2025

    • ai-dest-eval

      Public
      Evaluation of AI-enabled systematic review platforms
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Jul 7, 2025Jul 7, 2025

    • pre-rob

      Public
      Neural networks for RoB assessment in preclinical publications
      Python
      •3•0•0•1•Updated Jun 11, 2025Jun 11, 2025

    • jx3-pipeline-catalog

      Public
      Dockerfile
      •0•0•0•0•Updated Apr 5, 2025Apr 5, 2025

    • relisyr-v1.0

      Public
      relisyr shinyapp stable release version 1.0; to supplement publication of drug selection of the next arm of MND-SMART.
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Mar 1, 2025Mar 1, 2025

    • ad-soles-ct

      Public
      Source code for https://camarades.shinyapps.io/AD-SOLES-CT
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Oct 24, 2024Oct 24, 2024

    • relisyr-ad

      Public
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Sep 6, 2024Sep 6, 2024

    • ad-soles-ct-workflow

      Public
      To process and compile data to be pulled into ad-soles-ct and relisyr-ad
      R
      •1•0•0•0•Updated Aug 6, 2024Aug 6, 2024

    • soles-projects-old

      Public
      Jekyll theme based on Freelancer Start Bootstrap theme
      JavaScript
      •
      MIT License
      •2.7k•0•0•0•Updated Jun 14, 2024Jun 14, 2024

    • relisyr-ms

      Public
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Apr 17, 2024Apr 17, 2024

    • AutoAnnotation

      Public
      An R package for searching terms/regexes from a custom-designed dictionary in a list of pdf files
      R
      •
      Other
      •4•2•2•0•Updated Nov 10, 2023Nov 10, 2023

    • relisyrShiny

      Public
      repo for relisyr-mnd about/contributors summary shinyapp
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Aug 29, 2023Aug 29, 2023

    • rcas

      Public
      Package to get CAS numbers from publicly available domains: DrugBank drug vocabulary, common chemistry API, PubChem
      R
      •1•0•0•0•Updated Jul 3, 2023Jul 3, 2023

    • ASySD_shiny

      Public
      Deduplicate records from different biomedical databases
      R
      •
      GNU General Public License v3.0
      •1•2•0•0•Updated Feb 27, 2023Feb 27, 2023

    • ICAN-MND-demo

      Public
      R
      •1•0•0•0•Updated May 16, 2022May 16, 2022

    • MND-SOLES-CT-demo

      Public
      Demo app for drug repurposing
      drug-repurposingshiny-apps
      drug-repurposingshiny-apps
      R
      •1•1•0•0•Updated May 16, 2022May 16, 2022

    • syrf_userguide

      Public
      TeX
      •1•0•0•0•Updated Mar 22, 2022Mar 22, 2022

    • pubmedTools

      Public
      An R package to assistant users to use pubmed API to retrieve information into a table
      R
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated Jun 15, 2021Jun 15, 2021

    • fulltext_extractor

      Public
      Python
      •1•0•0•0•Updated May 5, 2021May 5, 2021

    • europePMCTools

      Public
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Apr 15, 2021Apr 15, 2021

    • meta-analysis-app-syrf

      Public
      R
      •
      Other
      •3•0•0•0•Updated Apr 1, 2021Apr 1, 2021

    • RegexRoB

      Public
      R
      •
      Other
      •1•0•0•0•Updated Feb 25, 2021Feb 25, 2021