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@VEuPathDB VEuPathDB Bioinformatics Resource Center

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    343 repositories

    • OAuth2Server

      Public
      Java
      •
      Apache License 2.0
      •0•0•1•1•Updated Sep 3, 2026Sep 3, 2026

    • ApiCommonWorkflow

      Public
      Perl
      •
      Apache License 2.0
      •2•0•0•3•Updated Sep 3, 2026Sep 3, 2026

    • orthoFinder-nextflow

      Public
      orthoFinder Nextflow workflow
      Python
      •
      MIT License
      •0•0•0•0•Updated Sep 3, 2026Sep 3, 2026

    • EbrcWebsiteCommon

      Public
      Perl
      •
      Apache License 2.0
      •3•3•10•5•Updated Sep 3, 2026Sep 3, 2026

    • ApiCommonModel

      Public
      Perl
      •
      Apache License 2.0
      •1•1•4•18•Updated Sep 3, 2026Sep 3, 2026

    • web-monorepo

      Public
      A monorepo that contains all frontend code for VEuPathDB websites
      TypeScript
      •
      Apache License 2.0
      •0•3•282•42•Updated Sep 3, 2026Sep 3, 2026

    • ApiCommonData

      Public
      Perl
      •
      Apache License 2.0
      •3•4•0•2•Updated Sep 3, 2026Sep 3, 2026

    • vdi-plugin-rnaseq

      Public
      Perl
      •
      Apache License 2.0
      •0•0•3•0•Updated Sep 3, 2026Sep 3, 2026

    • vdi-plugin-biom

      Public
      Python
      •
      Apache License 2.0
      •0•0•4•0•Updated Sep 3, 2026Sep 3, 2026

    • vdi-plugin-genelist

      Public
      Python
      •
      Apache License 2.0
      •0•0•4•0•Updated Sep 3, 2026Sep 3, 2026

    • vdi-plugin-bigwig

      Public
      Perl
      •
      Apache License 2.0
      •0•0•0•0•Updated Sep 3, 2026Sep 3, 2026

    • vdi-plugin-example

      Public template
      VDI handler plugin example repository.
      vdi
      vdi
      Shell
      •
      Apache License 2.0
      •0•0•1•0•Updated Sep 3, 2026Sep 3, 2026

    • vdi-plugin-noop

      Public
      Empty VDI plugin which performs no import or install processing of data.
      Makefile
      •
      Apache License 2.0
      •0•0•0•0•Updated Sep 3, 2026Sep 3, 2026

    • vdi-plugin-wrangler

      Public
      General purpose VDI plugin to process files for EDA loading using the study-wrangler
      R
      •
      Apache License 2.0
      •0•0•14•0•Updated Sep 3, 2026Sep 3, 2026

    • vdi-service

      Public
      VEuPathDB Dataset Installer
      vdi
      vdi
      Kotlin
      •
      Apache License 2.0
      •0•0•38•0•Updated Sep 3, 2026Sep 3, 2026

    • ApiCommonWebsite

      Public
      Perl
      •
      Apache License 2.0
      •1•3•4•9•Updated Sep 3, 2026Sep 3, 2026

    • SiteSearchData

      Public
      WDK Model and other code needed to run a WDK and generate reports to make JSON files to index in solr
      Python
      •
      Apache License 2.0
      •0•1•10•0•Updated Sep 2, 2026Sep 2, 2026

    • websiteconf

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Sep 1, 2026Sep 1, 2026

    • install

      Public
      Shell
      •
      Apache License 2.0
      •2•0•1•21•Updated Sep 1, 2026Sep 1, 2026

    • tsrc

      Public
      Repository containing the tsrc multi-repository manifest
      Apache License 2.0
      •1•0•1•1•Updated Sep 1, 2026Sep 1, 2026

    • EbrcModelCommon

      Public
      Java
      •
      Apache License 2.0
      •0•1•2•4•Updated Sep 1, 2026Sep 1, 2026

    • StaticContent

      Public
      HTML
      •
      Apache License 2.0
      •6•0•0•4•Updated Sep 1, 2026Sep 1, 2026

    • ClinEpiWebsite

      Public
      CSS
      •
      Apache License 2.0
      •0•2•3•1•Updated Aug 31, 2026Aug 31, 2026

    • WDK

      Public
      Java
      •
      Apache License 2.0
      •4•1•14•8•Updated Aug 29, 2026Aug 29, 2026

    • OrthoMCLModel

      Public
      Java
      •
      Apache License 2.0
      •0•0•0•1•Updated Aug 28, 2026Aug 28, 2026

    • service-multi-blast

      Public
      Async BLAST+ query service and supporting libraries.
      libraryqueryservice
      libraryqueryservicefastablastncbincbi-blast
      Kotlin
      •
      Apache License 2.0
      •0•0•19•0•Updated Aug 28, 2026Aug 28, 2026

    • pathfinder-skills

      Public
      Conversion of pathfinder to a set of skill markdown docs
      0•0•0•0•Updated Aug 27, 2026Aug 27, 2026

    • ReFlow

      Public
      Perl
      •
      Apache License 2.0
      •2•1•0•1•Updated Aug 27, 2026Aug 27, 2026

    • lib-compute-platform

      Public
      Async compute platform core.
      libraryasyncasynchronous
      libraryasyncasynchronouslibjob-queuecompute
      Kotlin
      •0•1•6•2•Updated Aug 25, 2026Aug 25, 2026

    • SolrDeployment

      Public
      XSLT
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 24, 2026Aug 24, 2026
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