Mann Labs
Repositories list
60 repositories
alphabase
PublicInfrastructure of AlphaX ecosystemalphapepttools
PublicSearch- and quantification-engine agnostic biological interpretation of proteomics dataalphadia
Publicmodular & open DIA searchalphakraken
Publictimsrust
PublicscPortrait
PublicscPortrait is a scalable toolkit to generate single-cell representations from raw microscopy imagesalphadia-search-rs
Publicdvp-io
Publicalpharaw
PublicAn open-source Python package to unify raw MS data accession and storage.alphapeptdeep
PublicDeep learning framework for proteomicsspec-figures
PublicscPortrait_manuscript
Publicalphaquant
PublicAn open-source Python package for accurate and sensitive peptide and protein quantification.alphashared
Publicalphapept-website
PublicWebsite for proteomics software tools developed in the MannLabsproteomics-agent-skills
PublicCurated agent skills for MS-proteomics data analysisvsmcDVP
Publicdirectlfq
PublicFast and accurate label-free quantification for small and very large numbers of proteomespy-lmd
PublicRead, create and write cutting data for the Leica LMD6 & LMD7 microscope. Build reproducible workflows to calibrate, import SVG files and convert single-cell se…alphatims
PublicAn open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck Institute of Biochemistr…alphaviz
PublicAlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquired with Bruker instrume…pydiaid
PublicSPARCStools
Publicresearch-highlights
Public.github
Publicproteomics_lab_agent
PublicQuantSelect
Publicalphapeptstats
PublicPython Package for the downstream analysis of mass-spectrometry-based proteomics dataalphamap
PublicAn open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.
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