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@KCL-BMEIS School of Biomedical Engineering & Imaging Sciences

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    42 repositories

    • NiftySeg

      Public
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •14•30•3•0•Updated Aug 24, 2026Aug 24, 2026

    • niftyreg

      Public
      This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utilities
      medical-image-registration
      medical-image-registration
      C
      •
      BSD 3-Clause "New" or "Revised" License
      •51•192•32•0•Updated Aug 12, 2026Aug 12, 2026

    • xnat-setup

      Public
      Scripts for creating and maintaining a dockerised XNAT
      Shell
      •
      MIT License
      •0•3•0•0•Updated Jul 24, 2026Jul 24, 2026

    • MONAI

      Public
      AI Toolkit for Healthcare Imaging
      Python
      •
      Apache License 2.0
      •1.6k•0•0•0•Updated Jul 22, 2026Jul 22, 2026

    • BMEISHackathon26

      Public
      6•0•0•1•Updated Jun 24, 2026Jun 24, 2026

    • spectrumdevice

      Public
      Python library for communicating with digitisers manufactured by Spectrum Instrumentation
      pythonlaboratoryscience
      pythonlaboratoryscienceinstrumentation
      Python
      •
      MIT License
      •3•7•5•0•Updated Jun 15, 2026Jun 15, 2026

    • Booth_MT_Robot_Control_PID

      Public
      Using Pololu stepper drivers to implement continous control via PID architecture in contrast to conventional CNC boad control.
      Python
      •1•0•0•0•Updated Jan 21, 2026Jan 21, 2026

    • pynaneye

      Public
      A Python interface for the ams OSRAM NanEye camera module evaluation kit
      Python
      •
      MIT License
      •0•1•1•0•Updated Jan 15, 2026Jan 15, 2026

    • VS_Seg

      Public
      Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)
      deep-learningpytorchmedical-image-segmentation
      deep-learningpytorchmedical-image-segmentationmonai
      Python
      •
      Apache License 2.0
      •10•49•1•1•Updated Jan 6, 2026Jan 6, 2026

    • RT3DUS-Needle-Tracking-PA-Beacon-Data

      Public
      Data and Python scripts for the creation of results presented in Real-time 3D Ultrasonic Needle Tracking with a Photoacoustic Beacon https://doi.org/10.48550/ar…
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 17, 2025Dec 17, 2025

    • UltraFlwr

      Public
      [MICCAI-AMAI'25] Federated YOLO with Flower and Ultralytics.
      yolofederated-learning
      yolofederated-learning
      Python
      •
      GNU Affero General Public License v3.0
      •9•30•26•1•Updated Nov 25, 2025Nov 25, 2025

    • robotic_endovascular_navigation_CTR

      Public
      Python
      •
      MIT License
      •0•1•0•0•Updated Apr 15, 2025Apr 15, 2025

    • Pneumonia-Detection

      Public
      An example Python pneumonia detection project for QMS for SaMD course.
      Python
      •
      MIT License
      •0•1•0•0•Updated Apr 9, 2025Apr 9, 2025

    • mock-or-drivers

      Public
      Documentation on Panasonic AW-UE150
      Python
      •1•0•0•0•Updated Mar 16, 2025Mar 16, 2025

    • KCL-DGX-cluster-documentation

      Public
      Python
      •1•11•5•0•Updated Mar 8, 2025Mar 8, 2025

    • AdvancedMachineLearningCourse

      Public
      Advanced Machine Learning Course
      Jupyter Notebook
      •5•14•0•0•Updated Nov 16, 2024Nov 16, 2024

    • MultiViT

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 1, 2024Aug 1, 2024

    • MONAI_JADE_Workshop

      Public
      Materials for workshop on using MONAI on JADE or other HPC environments
      Jupyter Notebook
      •
      MIT License
      •0•0•1•0•Updated Jun 24, 2024Jun 24, 2024

    • TWAISurgRob-OSS-List

      Public
      A list of open-source software projects related to the CME - Pillar 3
      Apache License 2.0
      •3•3•0•0•Updated May 21, 2024May 21, 2024

    • SpineAnnotationSlicelet

      Public
      Slicelet module to facilitate annotation of vertebrae from data stored on XNAT
      Python
      •0•0•2•0•Updated Apr 29, 2024Apr 29, 2024

    • ExeTera

      Public
      Reproducible analysis pipelines for large tabular datasets
      Python
      •
      Apache License 2.0
      •4•19•83•5•Updated Jan 11, 2024Jan 11, 2024

    • LazyResampling

      Public
      A reference implementation of lazy resampling for pytorch
      Jupyter Notebook
      •
      Apache License 2.0
      •0•0•0•0•Updated Nov 28, 2023Nov 28, 2023

    • trajectory_replay

      Public
      Python
      •0•0•0•0•Updated Nov 10, 2023Nov 10, 2023

    • pymagewell

      Public
      Python library for interfacing with Magewell ProCapture frame grabbers
      Python
      •
      MIT License
      •0•9•4•0•Updated Nov 4, 2023Nov 4, 2023

    • bundle-data

      Public
      Repository for storing MONAI bundle data
      0•0•0•0•Updated Oct 6, 2023Oct 6, 2023

    • gif

      Public
      C++
      •
      Other
      •0•1•1•0•Updated Jul 5, 2023Jul 5, 2023

    • xnat_form_maker

      Public
      Script to generate XNAT Form Plugins from Excell spreadsheets and RedCap Data Dictionaries
      Python
      •
      MIT License
      •0•1•1•0•Updated Jun 27, 2023Jun 27, 2023

    • RandomDataset

      Public
      Generates random tabular datasets for testing and fun
      Python
      •
      MIT License
      •1•3•4•1•Updated Mar 27, 2023Mar 27, 2023

    • labsnake

      Public
      Real-time scientific data acquisition, analysis and visualisation desktop application in Python
      MIT License
      •0•0•2•0•Updated Nov 29, 2022Nov 29, 2022

    • ai4vbh_defacing

      Public
      Shell
      •0•0•0•0•Updated Oct 31, 2022Oct 31, 2022
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