Repositories list

• the-turing-way

  Public
  Host repository for The Turing Way: a how to guide for reproducible data science

  TeX

  •

  Other

  •743•0•0•0•Updated Mar 5, 2026Mar 5, 2026

• TTW-Bookdash-GH-workshop

  Public
  This is for TTW bookDash GH Workshop

  Creative Commons Zero v1.0 Universal

  •8•0•0•0•Updated Nov 7, 2023Nov 7, 2023

• Ensembl-genome-browser-and-REST-API

  Public
  the Ensembl genome browser and REST API to retrieve genome annotation data

  Creative Commons Attribution 4.0 International

  •0•1•0•0•Updated Nov 3, 2023Nov 3, 2023

• workshop-tidyverse

  Public
  Workshop: Using R/tidyverse to analyze & visualize processed genomics data!

  HTML

  •

  BSD 3-Clause "New" or "Revised" License

  •21•2•0•0•Updated Mar 11, 2023Mar 11, 2023

• iscb2022_tidytranscriptomics

  Public
  Introduction to Tidy Transcriptomics

  scrna-seqtranscriptomics

  scrna-seqtranscriptomics

  R

  •

  Other

  •3•2•0•0•Updated Dec 12, 2022Dec 12, 2022

• bioada

  Public
  Data Science for Biomarkers Discovery

  bioinformaticstutorialrstats

  bioinformaticstutorialrstats

  R

  •0•3•0•0•Updated Nov 1, 2022Nov 1, 2022

• Elements-of-Style-Reproducible-Workflow-Creation-Maintenance-Tutorial

  Public
  Jupyter Notebook

  •

  MIT License

  •9•19•0•0•Updated Jul 3, 2022Jul 3, 2022

• bioinfo-targets

  Public
  Workshop on modular, reproducible bioinformatics workflows with the {targets} R package

  Creative Commons Attribution 4.0 International

  •1•3•0•0•Updated Jul 1, 2022Jul 1, 2022

• integrating_knowledge_data

  Public
  Integrating gene expression and biological knowledge for drug discovery and repurposing

  gene-expressiondrug-discoverydrug-repurposing+ 2

  gene-expressiondrug-discoverydrug-repurposingdata-integrationcausal-net

  HTML

  •

  Creative Commons Attribution 4.0 International

  •2•2•0•0•Updated May 10, 2022May 10, 2022

• Discussion

  Public
  This will include planning and discussion of the ISCB Academy

  Creative Commons Attribution 4.0 International

  •0•0•0•0•Updated May 4, 2022May 4, 2022

• keywords

  Public
  Documentation for implementing bioschemas in the ISCB Academy Website

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Feb 14, 2022Feb 14, 2022

• Template

  Public template
  This is a Template for all ISCB Tutorials

  Creative Commons Attribution 4.0 International

  •0•1•0•0•Updated Jan 13, 2022Jan 13, 2022

• ISCB-Academy-Tutorial-Community-Modelling

  Public
  It provides a brief overview of the key modelling paradigms that have been used to study microbiomes

  pythonmodellingmicrobiomes

  pythonmodellingmicrobiomes

  Jupyter Notebook

  •

  Creative Commons Attribution 4.0 International

  •4•4•0•0•Updated Dec 2, 2021Dec 2, 2021

• rnaseq

  Public
  RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control

  Nextflow

  •

  MIT License

  •851•0•0•0•Updated Sep 15, 2019Sep 15, 2019