Repositories list

• upptime

  Public
  Uptime monitor and status page for IDR, powered by @upptime

  uptime-monitorstatus-pageupptime

  uptime-monitorstatus-pageupptime

  Markdown

  •

  MIT License

  •0•0•0•0•Updated Mar 22, 2026Mar 22, 2026

• idr0051-fulton-tailbudlightsheet

  Public
  Metadata files for the idr0051 submission

  Python

  •4•0•0•0•Updated Mar 19, 2026Mar 19, 2026

• idr-metadata

  Public
  Curated metadata for all studies published in the Image Data Resource

  yamlmetadatacsv+ 1

  yamlmetadatacsvstudies

  Python

  •24•16•33•1•Updated Mar 3, 2026Mar 3, 2026

• idr.openmicroscopy.org

  Public
  Source for the IDR static website.

  jekyll-siteidr

  jekyll-siteidr

  HTML

  •

  Creative Commons Attribution 4.0 International

  •16•4•11•3•Updated Feb 27, 2026Feb 27, 2026

• deployment

  Public
  Deployment infrastructure for the Image Data Resource

  infrastructureansibleinventory+ 1

  infrastructureansibleinventoryplaybook

  Python

  •

  BSD 2-Clause "Simplified" License

  •14•14•19•4•Updated Feb 21, 2026Feb 21, 2026

• idr-notebooks

  Public
  Jupyter Notebooks for the Image Data Resource

  jupyternotebook

  jupyternotebook

  Jupyter Notebook

  •

  BSD 2-Clause "Simplified" License

  •20•19•6•5•Updated Feb 20, 2026Feb 20, 2026

• idr-gallery

  Public
  JavaScript

  •

  GNU Affero General Public License v3.0

  •15•1•5•4•Updated Feb 18, 2026Feb 18, 2026

• idr0168-zhang-mllocalization

  Public
  0•0•0•0•Updated Dec 5, 2025Dec 5, 2025

• idr0173-breiter-alphasynuclein

  Public
  Python

  •0•0•0•0•Updated Dec 5, 2025Dec 5, 2025

• ome-ngff-samples

  Public
  A catalog of all public OME-NGFF representative samples derived from IDR data

  idrzarrngff

  idrzarrngff

  HTML

  •4•2•2•0•Updated Oct 24, 2025Oct 24, 2025

• idr0170-rose-mibitof

  Public
  Python

  •1•0•0•0•Updated Aug 11, 2025Aug 11, 2025

• idr-utils

  Public
  Utility scripts for managing IDR submissions

  Python

  •

  BSD 2-Clause "Simplified" License

  •7•2•7•8•Updated Aug 5, 2025Aug 5, 2025

• idr0151-clark-patterning

  Public
  Python

  •0•0•0•0•Updated Jul 17, 2025Jul 17, 2025

• repos

  Public
  A super-module of all the repositories used for building the IDR

  git

  git

  Shell

  •2•0•0•0•Updated Jul 10, 2025Jul 10, 2025

• idr0108-sabinina-nuclearporecomplex

  Public
  Python

  •0•0•1•0•Updated Jun 30, 2025Jun 30, 2025

• idr0125-way-cellpainting

  Public
  Shell

  •1•0•2•0•Updated Jun 3, 2025Jun 3, 2025

• idr0156-szabo-tadcnd

  Public
  Temporary repository for "Szabo - TAD" submission. Rename or delete later.

  Python

  •0•0•0•0•Updated May 16, 2025May 16, 2025

• idr0160-lippincott-pyroptosis

  Public
  0•0•0•0•Updated May 16, 2025May 16, 2025

• idr0164-alzubi-hdbr

  Public
  Python

  •0•0•0•0•Updated May 16, 2025May 16, 2025

• vocabulary

  Public
  2•0•0•0•Updated May 8, 2025May 8, 2025

• idr0165-duinkerken-hyperspectraledx

  Public
  0•0•0•0•Updated Apr 25, 2025Apr 25, 2025

• idr0157-peters-bryophytes

  Public
  Python

  •0•0•0•0•Updated Apr 24, 2025Apr 24, 2025

• idr0159-strobl-insectlightsheet

  Public
  Python

  •0•0•0•0•Updated Mar 24, 2025Mar 24, 2025

• idr0150-friedman-cafs

  Public
  Python

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• idr0163-greenwald-tnbc

  Public
  Python

  •0•0•0•0•Updated Jan 8, 2025Jan 8, 2025

• idr0161-yayon-thymus

  Public
  0•0•0•0•Updated Dec 18, 2024Dec 18, 2024

• idr0092-ostrop-organoid

  Public
  Python

  •3•0•0•0•Updated Dec 11, 2024Dec 11, 2024

• idr0155-fu-alphasynuclein

  Public
  Python

  •0•0•0•0•Updated Nov 14, 2024Nov 14, 2024

• idr0158-radtke-lymphoma

  Public
  Python

  •0•0•0•0•Updated Nov 4, 2024Nov 4, 2024

• idr0138-lohoff-seqfish

  Public
  Python

  •0•0•0•0•Updated Sep 16, 2024Sep 16, 2024