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    12 repositories

    • gobig

      Public
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Jan 10, 2025Jan 10, 2025

    • NLP-Plant-Phenotypes

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Aug 15, 2023Aug 15, 2023

    • Plant-data

      Public
      Documenting the collection, preprocessing, and merging of a dataset of plant genes and associated phenotype descriptions.
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Jul 21, 2023Jul 21, 2023

    • GOMAP-singularity

      Public
      GOMAP-Singularity is the containerized version of GOMAP
      singularitygene-ontologyfunctional-annotation
      Shell
      •
      MIT License
      •5•11•10•0•Updated Jul 16, 2023Jul 16, 2023

    • GOMAP

      Public
      gene-ontologyfunctional-annotation
      R
      •
      MIT License
      •3•4•1•4•Updated May 22, 2023May 22, 2023

    • GOMAP-img-build

      Public
      The files to build singularity images for GOMAP pipeline
      Shell
      •1•1•0•0•Updated May 2, 2023May 2, 2023

    • GOMAP-base

      Public
      Singularity
      •1•1•0•0•Updated Sep 10, 2022Sep 10, 2022

    • GOMAP-Paper-2019.1

      Public
      Data, code, and results for our paper Standardized genome-wide function prediction enables comparative functional genomics: a new application area for Gene Onto…
      Ruby
      •
      Creative Commons Zero v1.0 Universal
      •1•0•7•0•Updated Apr 21, 2022Apr 21, 2022

    • PhyloGO

      Public
      Tools for (Gene) Ontology-Based Phylogenetics Methods
      phylogenetic-treesphylogeneticsgene-ontology
      Ruby
      •
      Mozilla Public License 2.0
      •0•0•0•0•Updated Jul 25, 2020Jul 25, 2020

    • GOMAP-boilerplate

      Public
      This is the basic SLURM job files necessary to run GOMAP on various HPC clusters
      Shell
      •1•2•0•0•Updated Sep 27, 2019Sep 27, 2019

    • maize-GAMER

      Public
      The raw proof-of-concept scripts for maize-GAMER project
      R
      •
      MIT License
      •2•3•1•0•Updated Jul 25, 2018Jul 25, 2018

    • coregg

      Public
      Java
      •0•1•0•0•Updated Nov 2, 2017Nov 2, 2017