Release 1.40.0

This is the last version of Ridgeback that will work for MSKCC's Juno cluster, all future versions will be designed for IRIS at MSKCC

What's Changed

• Add extensions to pipeline inputs by @buehlere in #382
• master to develop by @sivkovic in #385
• Merge with Release/1.39.0 by @nikhil in #393
• Bump version and fix tests by @nikhil in #392
• Release 1.40.0 by @nikhil in #394

Full Changelog: 1.38.0...1.40.0

Release 1.9.2 (#167)

Changelog

• Fixes an issue where Git clone errored out jobs on retry
• Better handling of errors when submitting a job
• Submit jobs asynchronously

1.9.0

Changelog

#151 Set maximum jobs on lsf
#155 Raise access walltime

1.7.0

Features

• Batch job status calls (#137, #140)
• Bumped version (#143)

Bug Fixes

• Fixed log path (#142)
• Fixed psycopg2 (#139)

1.6.0

Changelog

• Abort job API #119
• Update celeryes definition #117
• Add backoff times due to jobs stalling #120

1.5.0

• Add jitter/backoff times to job retires

1.4.0

#106 Add max cores for ACCESS
#108 Add default memory for ACCESS
#109 Update ACCESS flags
#110 Add Memory Argument
#112 Add docker auth for singularity pulls

1.3.0

Enhancements
Access pipeline working in Ridgeback #74
Feature/fix ridgeback job resonse and add task testing #90
Feature/update ridgeback job response #88

Bug fixes
Added missing migration #92
Add migrtion tests and update migrations #94 #93

1.2.0

• Updated Swagger UI
• Add resume support
• Robustify job cleanup
• Add travis testing and unit tests
• Added configurable ALLOWED_HOSTS
• Added started, submitted, and finished job dates
• Image fixes
• Stability and bug fixes

1.1.0

• Robustify job submission
• Improved lsf client
• Updated Makefile
• Slight tweaks and bug fixes