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Enable BEE to Run a Workflow Directly from a Provided Sbatch#1206

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rstyd wants to merge 2 commits intodevelopfrom
submit_sbatch
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Enable BEE to Run a Workflow Directly from a Provided Sbatch#1206
rstyd wants to merge 2 commits intodevelopfrom
submit_sbatch

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@rstyd rstyd commented Apr 17, 2026

This PR implements running workflows directly from an sbatch script. The one current requirement is that the sbatch script needs to include a ${error} and ${output} in the directives:

#SBATCH --output=${output}
#SBATCH --error=${error}

This is so BEE can save the stderr and stdout files to the appropriate location.

@rstyd rstyd requested a review from pagrubel April 17, 2026 20:06
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