3rd stable release of the `haddock-tools`

Merge pull request #25 from jbibbe4/molprobity_fix

Fix TypeError in molprobity.py

2nd stable release of the haddock-tools

New

• param_to_json.py
  Transform a haddockparam.web into a json structure to facilitate manipulation (e56f1c6)
• passive_from_active.py
  Output a list of passive residues surrounding active residues given as input (a6bc83e)
• pdb_gethaddockterms.py
  Extract HADDOCK terms (Eair, Evdw, Eelec, Edesolv and BSA) from HADDOCK formatted PDB file. (964975e, bb23737)

Modifications

• active-passive-to-ambig.py
  Output to standard output, not to file anymore (a1e9702)
• haddock_tbl_validation/validate_tbl.py
  Add support for OR statements errors + add silent option (212ec96, 3898536)
• mutate.py -> pdb_mutate.py
  Allow mutation input in command-line, improves consistency with CSB scripts (a129d4f, c1cbb4b)
• pdb_strict_format.py
  Improve regex pattern to parse ATOM/HETATM lines (191b999)

Others

• Documentation update (645541b, eabe209)
• Minor fixes (c771781, 89cdab7)

First stable release of the haddock-tools

This release include a variety of script utilities for the setup of HADDOCK calculations. They concentrate on PDB files manipulations and restraints generation and validation.