Skip to content

Draft convert RGB images#351

Draft
ieivanov wants to merge 1 commit intomainfrom
convert_rgb
Draft

Draft convert RGB images#351
ieivanov wants to merge 1 commit intomainfrom
convert_rgb

Conversation

@ieivanov
Copy link
Contributor

@ieivanov ieivanov commented Nov 18, 2025

This is a draft / hack PR where I map Samples in RGB imaged to Channels. I think it may be possible to acquire two channels, where one channel is a standard grayscale fluorescence and the other channels is an RGB image, in which case this workaround would break. I've also commented out the image plane metadata conversion which currently doesn't work. Testing with data in /hpc/instruments/cm.hummingbird/Amanda/2025_11_06_HandE_stitchng_test/HandE_stitch_test_3/, converting in /hpc/projects/comp.micro/exploratory/2025_11_06_HandE_stitchng_test/

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant