Skip to content

Multi dataset support#29

Open
ZuzanaSebb wants to merge 7 commits intobokulich-lab:mainfrom
ZuzanaSebb:multi-dataset-support
Open

Multi dataset support#29
ZuzanaSebb wants to merge 7 commits intobokulich-lab:mainfrom
ZuzanaSebb:multi-dataset-support

Conversation

@ZuzanaSebb
Copy link
Copy Markdown
Collaborator

Hi @misialq!

This PR adds support for uploading multiple raw sequencing datasets (e.g., 16S and ITS) per single metadata set via a new optional raw_reads_set_id column (defaults to "1"). Example TSVs, docs, and tests have been updated accordingly.

@ZuzanaSebb ZuzanaSebb linked an issue Mar 30, 2026 that may be closed by this pull request
@codecov
Copy link
Copy Markdown

codecov bot commented Mar 30, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 95.17%. Comparing base (63de51c) to head (d120a07).

Additional details and impacted files
@@            Coverage Diff             @@
##             main      #29      +/-   ##
==========================================
+ Coverage   95.13%   95.17%   +0.04%     
==========================================
  Files          27       27              
  Lines        1808     1825      +17     
==========================================
+ Hits         1720     1737      +17     
  Misses         88       88              

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

Support multiple datasets per sample set

1 participant