add multiple HiC mapping and filtering pipelines - be consistent in scaffolding and curation subworkflows#185
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MartinPippel wants to merge 4 commits intoNBISweden:mainfrom
Open
add multiple HiC mapping and filtering pipelines - be consistent in scaffolding and curation subworkflows#185MartinPippel wants to merge 4 commits intoNBISweden:mainfrom
MartinPippel wants to merge 4 commits intoNBISweden:mainfrom
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Also rebasing against main didn't result in any issues
$ git rebase main
Successfully rebased and updated refs/heads/strobealign.
Co-authored-by: Mahesh Binzer-Panchal <mahesh.binzer-panchal@nbis.se>
Co-authored-by: Mahesh Binzer-Panchal <mahesh.binzer-panchal@nbis.se>
Co-authored-by: Mahesh Binzer-Panchal <mahesh.binzer-panchal@nbis.se>
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thx @mahesh-panchal for the feedback. I will continue to include the missing aligner and protocols |
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initial commit that includes separate OmniC and Arima subworkflows that covers the yahs scaffolding subworkflow
aligner: bwamem2 (for now)
not implemented yet:
aim of this PR: