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Remove <code>.pem</code> file locality dependency and move to ssm for all terminal nonsense &lt;!-- This issue will be created in repo Daylily-Informatics/daylily-ephemeral-cluster (https://github.com/Daylily-Informatics/daylily-ephemeral-cluster). Changing this line has no effect. --&gt;

Status: Open.

#216 In Daylily-Informatics/daylily-ephemeral-cluster;

· iamh2o opened on Feb 9, 2026

Updates To <code>bin/daylily-create-ephemeral-cluster</code>

Status: Open.

#215 In Daylily-Informatics/daylily-ephemeral-cluster;

· iamh2o opened on Feb 8, 2026

Write About Usability Considerations W/Snakemake

Status: Open.

#83 In Daylily-Informatics/daylily-ephemeral-cluster;

· iamh2o opened on Sep 18, 2025

Pin all conda env definitions as setup for containerizing them all

Status: Open.

#80 In Daylily-Informatics/daylily-ephemeral-cluster;

· iamh2o opened on Mar 17, 2025

Enable Slurm Accounting Database

Status: Open.

#78 In Daylily-Informatics/daylily-ephemeral-cluster;

· iamh2o opened on Mar 16, 2025

Add logic to dynamically calculate the MAX spot allowed per resource group based on quotas avail.

Status: Open.

#77 In Daylily-Informatics/daylily-ephemeral-cluster;

· iamh2o opened on Mar 16, 2025

Add to daylily-create, a pinned version of a release of the repo to clone

Status: Open.

#76 In Daylily-Informatics/daylily-ephemeral-cluster;

· iamh2o opened on Mar 13, 2025

Pass Through Relevant Metadata To Aligner For Use In BAM

noneyet

Status: Open.

#75 In Daylily-Informatics/daylily-ephemeral-cluster;

· iamh2o opened on Mar 13, 2025

Change Meta File Names To Include RunID

new-feature

Status: Open.

#72 In Daylily-Informatics/daylily-ephemeral-cluster;

· iamh2o opened on Feb 3, 2025

Restore Functionality To Allow Jobs Only Running on i192 to also run on i128

capacity-balance

diversify-ec2types

Status: Open.

#71 In Daylily-Informatics/daylily-ephemeral-cluster;

· iamh2o opened on Jan 30, 2025

Add deepvariant simg and bwa2a img to ref cache

install-improvement

Status: Open.

#70 In Daylily-Informatics/daylily-ephemeral-cluster;

· iamh2o opened on Jan 29, 2025

modify the strobealigner and sentieon workflows to delete their pre-mrkdup bams

Status: Open.

#61 In Daylily-Informatics/daylily-ephemeral-cluster;

· iamh2o opened on Nov 5, 2024