Auto update dev-preindustrial+concentrations to use access-esm1p6/pr168-4

config.yaml

@@ -28,104 +28,103 @@ platform:
 # Modules for loading model executables
 modules:
   use:
-      - /g/data/vk83/modules
+  - /g/data/vk83/modules
+  - /g/data/vk83/prerelease/modules
   load:
-      - access-esm1p6/2026.01.000
-
-# Model configuration
+  - access-esm1p6/pr168-6
 model: access-esm1.6
 
 submodels:
-    - name: atmosphere
-      model: um
-      ncpus: 256
-      exe: um_hg3.exe
-      input:
+- name: atmosphere
+  model: um
+  ncpus: 256
+  exe: um_hg3.exe
+  input:
         # Aerosols
-        - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/atmosphere/aerosol/global.N96/2025.06.04/OCFF_1850_cmip7.anc
-        - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/atmosphere/aerosol/global.N96/2025.06.04/BC_1850_cmip7.anc
-        - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/atmosphere/aerosol/global.N96/2025.06.04/scycl_1850_cmip7.anc
-        - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/atmosphere/aerosol/global.N96/2025.06.04/Bio_1850_cmip7.anc
-        - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/aerosol/global.N96/2020.05.19/biogenic_351sm.N96L38
-        - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/aerosol/global.N96/2020.05.19/sulpc_oxidants_N96_L38
-        - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/aerosol/global.N96/2020.05.19/DMS_conc.N96
+  - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/atmosphere/aerosol/global.N96/2025.06.04/OCFF_1850_cmip7.anc
+  - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/atmosphere/aerosol/global.N96/2025.06.04/BC_1850_cmip7.anc
+  - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/atmosphere/aerosol/global.N96/2025.06.04/scycl_1850_cmip7.anc
+  - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/atmosphere/aerosol/global.N96/2025.06.04/Bio_1850_cmip7.anc
+  - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/aerosol/global.N96/2020.05.19/biogenic_351sm.N96L38
+  - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/aerosol/global.N96/2020.05.19/sulpc_oxidants_N96_L38
+  - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/aerosol/global.N96/2020.05.19/DMS_conc.N96
         # Forcing
-        - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/atmosphere/forcing/global.N96/2025.12.09/ozone_1850_cmip7.anc
+  - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/atmosphere/forcing/global.N96/2025.12.09/ozone_1850_cmip7.anc
         # Land
-        - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/atmosphere/land/biogeochemistry/global.N96/2025.11.18/Ndep_1850_cmip7.anc
-        - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/land/soiltype/global.N96/2020.05.19/qrparm.soil_igbp_vg
-        - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/share/atmosphere/land/vegetation/global.N96/2025.08.29/cable_vegfunc_N96.anc
-        - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/share/atmosphere/land/biogeochemistry/resolution_independent/2025.08.29/modis_phenology_csiro_13evergreen.txt
-        - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/share/atmosphere/land/biogeochemistry/resolution_independent/2025.11.18/pftlookup_cable3_OctB_update.csv
+  - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/atmosphere/land/biogeochemistry/global.N96/2025.11.18/Ndep_1850_cmip7.anc
+  - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/land/soiltype/global.N96/2020.05.19/qrparm.soil_igbp_vg
+  - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/share/atmosphere/land/vegetation/global.N96/2025.08.29/cable_vegfunc_N96.anc
+  - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/share/atmosphere/land/biogeochemistry/resolution_independent/2025.08.29/modis_phenology_csiro_13evergreen.txt
+  - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/share/atmosphere/land/biogeochemistry/resolution_independent/2025.11.18/pftlookup_cable3_OctB_update.csv
         # Spectral
-        - /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/spectral/resolution_independent/2020.05.19/spec3a_sw_hadgem1_6on
-        - /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/spectral/resolution_independent/2020.05.19/spec3a_lw_hadgem1_6on
+  - /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/spectral/resolution_independent/2020.05.19/spec3a_sw_hadgem1_6on
+  - /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/spectral/resolution_independent/2020.05.19/spec3a_lw_hadgem1_6on
         # Grids
-        - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/grids/global.N96/2020.05.19/qrparm.mask
-        - /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/grids/resolution_independent/2020.05.19/vertlevs_G3
+  - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/atmosphere/grids/global.N96/2020.05.19/qrparm.mask
+  - /g/data/vk83/configurations/inputs/access-esm1p5/share/atmosphere/grids/resolution_independent/2020.05.19/vertlevs_G3
         # STASH
-        - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/share/atmosphere/stash/2026.01.21/
+  - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/share/atmosphere/stash/2026.01.21/
 
-    - name: ocean
-      model: mom
-      ncpus: 240
-      exe: mom5_access_cm
-      input:
+- name: ocean
+  model: mom
+  ncpus: 240
+  exe: mom5_access_cm
+  input:
         # Biogeochemistry
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/biogeochemistry/global.1deg/2025.09.22/SFe_Hamiltonetal2020_monthly_clim.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/biogeochemistry/global.1deg/2020.05.19/ocmip2_press_monthly_om1p5_bc.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/biogeochemistry/global.1deg/2025.09.22/SFe_Hamiltonetal2020_monthly_clim.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/biogeochemistry/global.1deg/2020.05.19/ocmip2_press_monthly_om1p5_bc.nc
         # Tides
-        - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/tides/global.1deg/2020.05.19/roughness_amp.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/tides/global.1deg/2020.05.19/tideamp.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/tides/global.1deg/2020.05.19/roughness_amp.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/tides/global.1deg/2020.05.19/tideamp.nc
         # Shortwave
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/shortwave_penetration/global.1deg/2025.06.23/ssw_atten_depth.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/shortwave_penetration/global.1deg/2025.06.23/ssw_atten_depth.nc
         # Grids
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/grids/mosaic/global.1deg/2025.07.29/grid_spec.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/grids/mosaic/global.1deg/2025.07.29/ocean_mosaic.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/grids/mosaic/global.1deg/2025.07.29/ocean_hgrid.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/grids/bathymetry/global.1deg/2025.07.29/topog.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/grids/vertical/global.1deg/2025.07.29/ocean_vgrid.nc
-
-    - name: ice
-      model: cice5
-      ncpus: 12
-      exe: cice_access_360x300_30x300.exe
-      input:
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/grids/mosaic/global.1deg/2025.07.29/grid_spec.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/grids/mosaic/global.1deg/2025.07.29/ocean_mosaic.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/grids/mosaic/global.1deg/2025.07.29/ocean_hgrid.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/grids/bathymetry/global.1deg/2025.07.29/topog.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ocean/grids/vertical/global.1deg/2025.07.29/ocean_vgrid.nc
+
+- name: ice
+  model: cice5
+  ncpus: 12
+  exe: cice_access_360x300_30x300.exe
+  input:
         # Grids
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ice/grids/global.1deg/2025.07.29/kmt.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ice/grids/global.1deg/2025.07.29/grid.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ice/grids/global.1deg/2025.07.29/kmt.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/ice/grids/global.1deg/2025.07.29/grid.nc
         # Iceberg flux
-        - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/share/ice/iceberg/global.1deg/2025.09.16/lice_discharge_iceberg.nc
+  - /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/share/ice/iceberg/global.1deg/2025.09.16/lice_discharge_iceberg.nc
 
-    - name: coupler
-      model: oasis
-      ncpus: 0
-      input:
+- name: coupler
+  model: oasis
+  ncpus: 0
+  input:
         # Grids
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/grids/global.oi_1deg.a_N96/2025.07.29/grids.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/grids/global.oi_1deg.a_N96/2025.07.29/areas.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/grids/global.oi_1deg.a_N96/2020.05.19/masks.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/grids/global.oi_1deg.a_N96/2025.07.29/grids.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/grids/global.oi_1deg.a_N96/2025.07.29/areas.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/coupler/grids/global.oi_1deg.a_N96/2020.05.19/masks.nc
         # Remapping weights
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_cice_to_um1t_CONSERV_FRACNNEI.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_cice_to_um1u_CONSERV_FRACNNEI.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_cice_to_um1v_CONSERV_FRACNNEI.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_um1t_to_cice_CONSERV_DESTAREA.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_um1t_to_cice_CONSERV_FRACNNEI.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_um1u_to_cice_CONSERV_FRACNNEI.nc
-        - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_um1v_to_cice_CONSERV_FRACNNEI.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_cice_to_um1t_CONSERV_FRACNNEI.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_cice_to_um1u_CONSERV_FRACNNEI.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_cice_to_um1v_CONSERV_FRACNNEI.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_um1t_to_cice_CONSERV_DESTAREA.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_um1t_to_cice_CONSERV_FRACNNEI.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_um1u_to_cice_CONSERV_FRACNNEI.nc
+  - /g/data/vk83/configurations/inputs/access-esm1p6/modern/share/coupler/remapping_weights/global.oi_1deg.a_N96/2025.08.06/rmp_um1v_to_cice_CONSERV_FRACNNEI.nc
 
 # Collation
 collate:
-    enable: false
+  enable: false
 
 restart: /g/data/vk83/prerelease/configurations/inputs/access-esm1p6/modern/pre-industrial/restart/2025.12.22
 
 # Timing controls
 calendar:
-    runtime:
-        years: 1
-        months: 0
-        days: 0
+  runtime:
+    years: 1
+    months: 0
+    days: 0
 
 runspersub: 1
 
@@ -135,23 +134,23 @@ restart_freq: 10YS
 runlog: true
 manifest:
   reproduce:
-    exe: true
+    exe: false
     input: true
 
 
 stacksize: unlimited
 qsub_flags: -W umask=027
 mpi:
   flags:
-    - --mca mpi_yield_when_idle true
+  - --mca mpi_yield_when_idle true
 payu_minimum_version: 1.2.0
 
 # Sync options for automatically copying data from ephemeral scratch space to
 # longer term storage
 sync:
-    enable: False # set path below and change to true
-    restarts: True
-    path: null # Set to location on /g/data or a remote server and path (rsync syntax)
+  enable: false   # set path below and change to true
+  restarts: true
+  path: null   # Set to location on /g/data or a remote server and path (rsync syntax)
 
 # If a postscript included (such as the automated netcdf conversion), the latest output and restart files will not
 # be automatically synced at the end of a run. To sync the latest output after a postscript has completed,