WIP change Molecule for #55 #1079
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| name: Rust | |
| permissions: | |
| contents: read | |
| on: | |
| push: | |
| branches: [ "release", "main" ] | |
| pull_request: | |
| branches: [ "release", "main" ] | |
| env: | |
| CARGO_TERM_COLOR: always | |
| jobs: | |
| check: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v6 | |
| - name: Check | |
| run: cargo check | |
| full-build: | |
| runs-on: ubuntu-latest | |
| needs: check | |
| steps: | |
| - uses: actions/checkout@v6 | |
| - name: Build all features | |
| run: | | |
| cargo build -p mzcv --no-default-features | |
| cargo build -p mzcv --no-default-features --features serde | |
| cargo build -p mzcv --no-default-features --features search-index | |
| cargo build -p mzcv --no-default-features --features http | |
| cargo build -p mzcore --no-default-features | |
| cargo build -p mzcore --no-default-features --features isotopes | |
| cargo build -p mzcore --no-default-features --features glycan-render | |
| cargo build -p mzcore --no-default-features --features glycan-render-bitmap | |
| cargo build -p mzcore --no-default-features --features search-index | |
| cargo build -p mzcore --no-default-features --features http | |
| cargo build -p mzcore --no-default-features --features coloured-errors | |
| cargo build -p mzcore --no-default-features --features isotopes,glycan-render | |
| cargo build -p mzcore --no-default-features --features isotopes,glycan-render,search-index | |
| cargo build -p mzannotate | |
| cargo build -p mzident --no-default-features | |
| cargo build -p mzident --no-default-features --features mzannotate | |
| cargo build -p imgt | |
| cargo build -p mzalign | |
| cargo build -p mzalign --features rayon | |
| cargo build -p mzalign --features imgt | |
| cargo build -p mzalign --features rayon,imgt | |
| fmt: | |
| runs-on: ubuntu-latest | |
| needs: check | |
| steps: | |
| - uses: actions/checkout@v6 | |
| - name: Run fmt | |
| run: | | |
| rustup component add --toolchain nightly-x86_64-unknown-linux-gnu rustfmt | |
| cargo +nightly fmt --check | |
| clippy: | |
| runs-on: ubuntu-latest | |
| needs: check | |
| steps: | |
| - uses: actions/checkout@v6 | |
| - name: Run clippy | |
| run: cargo clippy | |
| test: | |
| runs-on: ubuntu-latest | |
| env: | |
| CARGO_ENCODED_RUSTFLAGS: --cfg=github_action | |
| needs: check | |
| steps: | |
| - uses: actions/checkout@v6 | |
| - name: Run tests | |
| run: | | |
| cargo test -p mzcv --no-fail-fast --features serde,search-index,http | |
| cargo test -p mzcore --no-fail-fast --features isotopes,glycan-render,search-index | |
| cargo test -p mzannotate --no-fail-fast | |
| cargo test -p mzident --no-fail-fast | |
| cargo test -p imgt --no-fail-fast | |
| cargo test -p mzalign --no-fail-fast --features imgt,rayon | |
| minimal-dependencies: | |
| runs-on: ubuntu-latest | |
| needs: check | |
| steps: | |
| - uses: actions/checkout@v6 | |
| - name: Run minimal version test | |
| run: | | |
| cargo install cargo-hack | |
| cargo install cargo-minimal-versions | |
| cargo minimal-versions check --workspace --ignore-private |