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ENH: heatmap with FeatureTable[...] artifactsΒ #82

@VinzentRisch

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@VinzentRisch

Currently it is only possible to create a heatmap with metadata. It would be great to be able to also create the heatmap visualisation with FeatureTable artifacts as input.

For the MOSHPIT docs I wanted to create a heatmap with outputs from the q2-rgi plugin. This output can be converted into metadata and from this it is possible to create a heatmap. But the counts in the metadata are reads mapped to a gene, to make them comparable they have to be normalised. For this the amr action also outputs a FeatureTable[Frequency] that then can be normalised with the feature-table normalise action. But then with these normalised counts I can't create a heatmap.

@lizgehret Have you already thought about this for the future? Or is there maybe a way to convert the FeatureTable[Frequency] to metadata so it can be used with the heatmap?

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