cannot --restart #53
Description
When the current operation is interrupted, I want to try --restart (-r), but an error occurs.
Example (current operation):
pygetpapers -q "(PFAS AND (concentration OR occurrence))" -k 10 -o "test2" -x -s -p --synonym --startdate 2024-09-01 --enddate 2024-11-30
INFO: Total Hits are 3591
10it [00:00, ?it/s]
INFO: Saving XML files to D:\MyFile\pycharm_project\agents\test2*\fulltext.xml
0%| | 0/10 [00:00<?, ?it/s]INFO: Extracted the files for this paper
INFO: Wrote the pdf file for PMC11461027
10%|████████████████ | 1/10 [00:09<01:23, 9.26s/it]INFO: Extracted the files for this paper
INFO: Wrote the pdf file for PMC11650586
20%|████████████████████████████████▏ | 2/10 [00:57<04:19, 32.48s/it]INFO: Extracted the files for this paper
INFO: Wrote the pdf file for PMC11580174
INFO: Wrote the pdf file for PMC11580174
30%|████████████████████████████████████████████████▎ | 3/10 [01:47<04:11, 35.94s/it]
Then I use Ctrl+C to interrupt:
KeyboardInterrupt
^C
And then I tried to restart:
pygetpapers -q "(PFAS AND (concentration OR occurrence))" -k 10 -o "test2" -x -s -p --synonym --startdate 2024-09-01 --enddate 2024-11-30 -r
Then an error occurred:
Traceback (most recent call last):
File "", line 198, in _run_module_as_main
File "", line 88, in run_code
File "D:\program_anaconda\envs\agents\Scripts\pygetpapers.exe_main.py", line 7, in
File "D:\program_anaconda\envs\agents\Lib\site-packages\pygetpapers\pygetpapers.py", line 537, in main
callpygetpapers.create_argparser()
File "D:\program_anaconda\envs\agents\Lib\site-packages\pygetpapers\pygetpapers.py", line 530, in create_argparser
self.runs_pygetpapers_for_given_args(self.query_namespace)
File "D:\program_anaconda\envs\agents\Lib\site-packages\pygetpapers\pygetpapers.py", line 312, in runs_pygetpapers_for_given_args
api_handler.check_query_logic_and_run()
File "D:\program_anaconda\envs\agents\Lib\site-packages\pygetpapers\pygetpapers.py", line 189, in check_query_logic_and_run
self.api.restart(self.query_namespace)
File "D:\program_anaconda\envs\agents\Lib\site-packages\pygetpapers\repository\europe_pmc.py", line 244, in restart
self.get_supplementary_metadata(
TypeError: EuropePmc.get_supplementary_metadata() got an unexpected keyword argument 'metadata_dictionary'
I'm confused that there was a TypeError. How to resolve this problem? Thanks!