Model run functions do not work if outputs not specified

[lwhittles]

mpoxseir/R/run.R

Lines 202 to 207 in faae90a

	if (any(!outputs_retained %in% names(indices))) {
	stop("outputs_retained must be in the named outputs of transformed model output")
	}
	if (is.null(outputs_retained)) {
	outputs_retained <- names(indices)
	}

The output dimensions do not match after introducing vaccination