fix url

Author: cdiener

recipes/agora1/agora1.nf

@@ -62,8 +62,8 @@ process DownloadGtdbTables {
 
     script:
     """
-    wget --no-check-certificate -O gtdb_bac.tar.gz https://data.gtdb.ecogenomic.org/releases/release${params.gtdb}/${params.gtdb}.0/bac120_metadata_r${params.gtdb}.tar.gz
-    wget --no-check-certificate -O gtdb_ar.tar.gz https://data.gtdb.ecogenomic.org/releases/release${params.gtdb}/${params.gtdb}.0/ar53_metadata_r${params.gtdb}.tar.gz
+    wget --no-check-certificate -O gtdb_bac.tar.gz https://data.gtdb.ecogenomic.org/releases/release${params.gtdb}/${params.gtdb}.0/bac120_metadata_r${params.gtdb}.tsv.gz
+    wget --no-check-certificate -O gtdb_ar.tar.gz https://data.gtdb.ecogenomic.org/releases/release${params.gtdb}/${params.gtdb}.0/ar53_metadata_r${params.gtdb}.tsv.gz
     tar -xf gtdb_bac.tar.gz
     tar -xf gtdb_ar.tar.gz
     """

recipes/agora2/agora2.nf

@@ -65,8 +65,8 @@ process DownloadGtdbTables {
 
     script:
     """
-    wget --no-check-certificate -O gtdb_bac.tar.gz https://data.gtdb.ecogenomic.org/releases/release${params.gtdb}/${params.gtdb}.0/bac120_metadata_r${params.gtdb}.tar.gz
-    wget --no-check-certificate -O gtdb_ar.tar.gz https://data.gtdb.ecogenomic.org/releases/release${params.gtdb}/${params.gtdb}.0/ar53_metadata_r${params.gtdb}.tar.gz
+    wget --no-check-certificate -O gtdb_bac.tar.gz https://data.gtdb.ecogenomic.org/releases/release${params.gtdb}/${params.gtdb}.0/bac120_metadata_r${params.gtdb}.tsv.gz
+    wget --no-check-certificate -O gtdb_ar.tar.gz https://data.gtdb.ecogenomic.org/releases/release${params.gtdb}/${params.gtdb}.0/ar53_metadata_r${params.gtdb}.tsv.gz
     tar -xf gtdb_bac.tar.gz
     tar -xf gtdb_ar.tar.gz
     """

recipes/uhgg/uhgg.nf

@@ -68,8 +68,8 @@ process DownloadGtdbTables {
 
     script:
     """
-    wget --no-check-certificate -O gtdb_bac.tar.gz https://data.gtdb.ecogenomic.org/releases/release${params.gtdb}/${params.gtdb}.0/bac120_metadata_r${params.gtdb}.tar.gz
-    wget --no-check-certificate -O gtdb_ar.tar.gz https://data.gtdb.ecogenomic.org/releases/release${params.gtdb}/${params.gtdb}.0/ar53_metadata_r${params.gtdb}.tar.gz
+    wget --no-check-certificate -O gtdb_bac.tar.gz https://data.gtdb.ecogenomic.org/releases/release${params.gtdb}/${params.gtdb}.0/bac120_metadata_r${params.gtdb}.tsv.gz
+    wget --no-check-certificate -O gtdb_ar.tar.gz https://data.gtdb.ecogenomic.org/releases/release${params.gtdb}/${params.gtdb}.0/ar53_metadata_r${params.gtdb}.tsv.gz
     tar -xf gtdb_bac.tar.gz
     tar -xf gtdb_ar.tar.gz
     """