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Design of "cell_lineages" folder placement #96

@ehuan2

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@ehuan2

Currently, we don't love the way that "cell_lineages" and the data is being stored. We need a yaml file that points to the cell lineages. In #93 , I moved this to be under scTimeBench/shared/datasets/cell_lineages because I wanted it to be tightly coupled with default_datasets.yaml/optional_datasets.yaml. But there are a couple of issues:

  1. The path in the .yaml is now inconsistent with the data path, as the cell_lineages refers to the relative path, whereas the ./data is relative to the root directory of where scTimeBench gets called.
  2. Cell lineages and data paths should ideally be coupled.
  3. I still like the idea of keeping track of cell lineages, as it's easier for users to see which cell lineages are being used.

To be fixed soon.

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