NetPathMiner/NAMESPACE at master · ahmohamed/NetPathMiner · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
# Generated by roxygen2: do not edit by hand

export(KGML2igraph)
export(NPMdefaults)
export(SBML2igraph)
export(assignEdgeWeights)
export(biopax2igraph)
export(colorVertexByAttr)
export(expandComplexes)
export(extractPathNetwork)
export(fetchAttribute)
export(getAttrNames)
export(getAttrStatus)
export(getAttribute)
export(getGeneSetNetworks)
export(getGeneSets)
export(getPathsAsEIDs)
export(layoutVertexByAttr)
export(makeGeneNetwork)
export(makeMetaboliteNetwork)
export(makeReactionNetwork)
export(pathClassifier)
export(pathCluster)
export(pathRanker)
export(pathsToBinary)
export(plotAllNetworks)
export(plotClassifierROC)
export(plotClusterMatrix)
export(plotClusterProbs)
export(plotClusters)
export(plotCytoscapeGML)
export(plotNetwork)
export(plotPathClassifier)
export(plotPathCluster)
export(plotPaths)
export(predictPathClassifier)
export(predictPathCluster)
export(registerMemoryErr)
export(reindexNetwork)
export(rmAttribute)
export(rmSmallCompounds)
export(setAttribute)
export(simplifyReactionNetwork)
export(stdAttrNames)
export(toGraphNEL)
export(vertexDeleteReconnect)
import(igraph)
useDynLib(NetPathMiner)