Error evaluating if statement in time_amplifications.R

[tc13]

AmplificationTimeR/R/time_amplification.R

Line 2353 in 18000de

if(is_WGD == FALSE & tmp_cn$n1A_sum <= 2 & tmp_cn$n2A_sum <= 2 & tmp_cn$nMin1_A > 0 & tmp_cn$nMin2_A > 0){

Hello, I occasionally get the following error when using AmplificationTimeR

Error in if (is_WGD == FALSE & tmp_cn$n1A_sum <= 2 & tmp_cn$n2A_sum <= :
missing value where TRUE/FALSE needed
Calls: time_amplification
Execution halted

I think this is caused by at least one of the values in the if statement being NA. I am using the standard input formats from dpclust, Battenberg etc. If useful, I can attempt to work out which of the values is NA in my data

[mjakobs]

Hi @tc13 ,

Thank you for your interest in AmplificationTimeR. Would you be able to provide a reproducible example, as well as the version numbers of dpclust and Battenberg that you are using?