When there is eg both "antisense" and "snoRNA" at a locus, how do we want to count them?
4 ways:
- alphabetically sorted and joined
- Count all of them (adds up to more than 100%)
- Probabalistically - ie fractionally count (ie .5 if 2)
- Count the "most important" (ie in an order)
These should be command line options in bam-biotype
When there is eg both "antisense" and "snoRNA" at a locus, how do we want to count them?
4 ways:
These should be command line options in bam-biotype