Fix network_type docstring formatting in PerceptualLoss #8670
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📝 WalkthroughWalkthroughTwo targeted changes across two files: First, a typo correction in Estimated code review effort🎯 2 (Simple) | ⏱️ ~10 minutes Pre-merge checks and finishing touches❌ Failed checks (1 warning, 2 inconclusive)
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monai/losses/perceptual.py (1)
75-75: Update type annotation to match accepted types.Type annotation specifies
strbut should bestr | PercetualNetworkTypeto match the docstring and actual usage.🔎 Proposed fix
- network_type: str = PercetualNetworkType.alex, + network_type: str | PercetualNetworkType = PercetualNetworkType.alex,
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monai/losses/perceptual.py (2)
52-56: Docstring update is accurate but type annotation doesn't match.The docstring correctly documents that
network_typeaccepts bothstrandPercetualNetworkType, but the type annotation on line 75 only specifiesstr.
98-102: No issues found.StrEnummembers inherit fromstr, so.lower()works on enum inputs and comparison againstlist(PercetualNetworkType)succeeds for both string and enum inputs. Logic is correct as written.
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StrEnum(68-90)
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monai/losses/perceptual.py (1)
52-60: LGTM: Improved docstring clarity.The reformatted list of valid
network_typevalues is clearer than the previous inline notation.
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Hi @virginiafdez, The spelling/enum issue in PerceptualLoss has been fixed (PercetualNetworkType → PerceptualNetworkType), and all references/docstrings have been updated accordingly. Additionally, all missing DCO sign-offs have been added via remediation commits. Everything should now be in order for review. |
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monai/data/image_writer.py (1)
119-128: Move dictionary to module level.The dictionary is recreated on every call. Define it as a module-level constant.
🔎 Proposed refactor
Move the dictionary definition outside the function, near the top of the file after line 64:
SUPPORTED_WRITERS: dict = {} _RECOMMENDED_PACKAGES = { "png": "Pillow", "jpg": "Pillow", "jpeg": "Pillow", "nii": "nibabel or SimpleITK", "niigz": "nibabel or SimpleITK", "nrrd": "pynrrd", "tif": "Pillow or tifffile", "tiff": "Pillow or tifffile", }Then reference it in the function at line 131:
- RECOMMENDED_PACKAGES = { - "png": "Pillow", - "jpg": "Pillow", - "jpeg": "Pillow", - "nii": "nibabel or SimpleITK", - "nii.gz": "nibabel or SimpleITK", - "nrrd": "pynrrd", - "tif": "Pillow or tifffile", - "tiff": "Pillow or tifffile", - } - fmt_clean = fmt.replace(".", "").lower() - package_hint = RECOMMENDED_PACKAGES.get(fmt_clean, "") + package_hint = _RECOMMENDED_PACKAGES.get(fmt_clean, "")Note: Also see the critical bug in line 130 regarding "nii.gz" handling.
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Bumps [actions/checkout](https://github.com/actions/checkout) from 4 to 6. <details> <summary>Release notes</summary> <p><em>Sourced from <a href="https://github.com/actions/checkout/releases">actions/checkout's releases</a>.</em></p> <blockquote> <h2>v6.0.0</h2> <h2>What's Changed</h2> <ul> <li>Update README to include Node.js 24 support details and requirements by <a href="https://github.com/salmanmkc"><code>@salmanmkc</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2248">actions/checkout#2248</a></li> <li>Persist creds to a separate file by <a href="https://github.com/ericsciple"><code>@ericsciple</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2286">actions/checkout#2286</a></li> <li>v6-beta by <a href="https://github.com/ericsciple"><code>@ericsciple</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2298">actions/checkout#2298</a></li> <li>update readme/changelog for v6 by <a href="https://github.com/ericsciple"><code>@ericsciple</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2311">actions/checkout#2311</a></li> </ul> <p><strong>Full Changelog</strong>: <a href="https://github.com/actions/checkout/compare/v5.0.0...v6.0.0">https://github.com/actions/checkout/compare/v5.0.0...v6.0.0</a></p> <h2>v6-beta</h2> <h2>What's Changed</h2> <p>Updated persist-credentials to store the credentials under <code>$RUNNER_TEMP</code> instead of directly in the local git config.</p> <p>This requires a minimum Actions Runner version of <a href="https://github.com/actions/runner/releases/tag/v2.329.0">v2.329.0</a> to access the persisted credentials for <a href="https://docs.github.com/en/actions/tutorials/use-containerized-services/create-a-docker-container-action">Docker container action</a> scenarios.</p> <h2>v5.0.1</h2> <h2>What's Changed</h2> <ul> <li>Port v6 cleanup to v5 by <a href="https://github.com/ericsciple"><code>@ericsciple</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2301">actions/checkout#2301</a></li> </ul> <p><strong>Full Changelog</strong>: <a href="https://github.com/actions/checkout/compare/v5...v5.0.1">https://github.com/actions/checkout/compare/v5...v5.0.1</a></p> <h2>v5.0.0</h2> <h2>What's Changed</h2> <ul> <li>Update actions checkout to use node 24 by <a href="https://github.com/salmanmkc"><code>@salmanmkc</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2226">actions/checkout#2226</a></li> <li>Prepare v5.0.0 release by <a href="https://github.com/salmanmkc"><code>@salmanmkc</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2238">actions/checkout#2238</a></li> </ul> <h2>⚠️ Minimum Compatible Runner Version</h2> <p><strong>v2.327.1</strong><br /> <a href="https://github.com/actions/runner/releases/tag/v2.327.1">Release Notes</a></p> <p>Make sure your runner is updated to this version or newer to use this release.</p> <p><strong>Full Changelog</strong>: <a href="https://github.com/actions/checkout/compare/v4...v5.0.0">https://github.com/actions/checkout/compare/v4...v5.0.0</a></p> <h2>v4.3.1</h2> <h2>What's Changed</h2> <ul> <li>Port v6 cleanup to v4 by <a href="https://github.com/ericsciple"><code>@ericsciple</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2305">actions/checkout#2305</a></li> </ul> <p><strong>Full Changelog</strong>: <a href="https://github.com/actions/checkout/compare/v4...v4.3.1">https://github.com/actions/checkout/compare/v4...v4.3.1</a></p> <h2>v4.3.0</h2> <h2>What's Changed</h2> <ul> <li>docs: update README.md by <a href="https://github.com/motss"><code>@motss</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1971">actions/checkout#1971</a></li> <li>Add internal repos for checking out multiple repositories by <a href="https://github.com/mouismail"><code>@mouismail</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1977">actions/checkout#1977</a></li> <li>Documentation update - add recommended permissions to Readme by <a href="https://github.com/benwells"><code>@benwells</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2043">actions/checkout#2043</a></li> </ul> <!-- raw HTML omitted --> </blockquote> <p>... (truncated)</p> </details> <details> <summary>Changelog</summary> <p><em>Sourced from <a href="https://github.com/actions/checkout/blob/main/CHANGELOG.md">actions/checkout's changelog</a>.</em></p> <blockquote> <h1>Changelog</h1> <h2>V6.0.0</h2> <ul> <li>Persist creds to a separate file by <a href="https://github.com/ericsciple"><code>@ericsciple</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2286">actions/checkout#2286</a></li> <li>Update README to include Node.js 24 support details and requirements by <a href="https://github.com/salmanmkc"><code>@salmanmkc</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2248">actions/checkout#2248</a></li> </ul> <h2>V5.0.1</h2> <ul> <li>Port v6 cleanup to v5 by <a href="https://github.com/ericsciple"><code>@ericsciple</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2301">actions/checkout#2301</a></li> </ul> <h2>V5.0.0</h2> <ul> <li>Update actions checkout to use node 24 by <a href="https://github.com/salmanmkc"><code>@salmanmkc</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2226">actions/checkout#2226</a></li> </ul> <h2>V4.3.1</h2> <ul> <li>Port v6 cleanup to v4 by <a href="https://github.com/ericsciple"><code>@ericsciple</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2305">actions/checkout#2305</a></li> </ul> <h2>V4.3.0</h2> <ul> <li>docs: update README.md by <a href="https://github.com/motss"><code>@motss</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1971">actions/checkout#1971</a></li> <li>Add internal repos for checking out multiple repositories by <a href="https://github.com/mouismail"><code>@mouismail</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1977">actions/checkout#1977</a></li> <li>Documentation update - add recommended permissions to Readme by <a href="https://github.com/benwells"><code>@benwells</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2043">actions/checkout#2043</a></li> <li>Adjust positioning of user email note and permissions heading by <a href="https://github.com/joshmgross"><code>@joshmgross</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2044">actions/checkout#2044</a></li> <li>Update README.md by <a href="https://github.com/nebuk89"><code>@nebuk89</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2194">actions/checkout#2194</a></li> <li>Update CODEOWNERS for actions by <a href="https://github.com/TingluoHuang"><code>@TingluoHuang</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2224">actions/checkout#2224</a></li> <li>Update package dependencies by <a href="https://github.com/salmanmkc"><code>@salmanmkc</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/2236">actions/checkout#2236</a></li> </ul> <h2>v4.2.2</h2> <ul> <li><code>url-helper.ts</code> now leverages well-known environment variables by <a href="https://github.com/jww3"><code>@jww3</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1941">actions/checkout#1941</a></li> <li>Expand unit test coverage for <code>isGhes</code> by <a href="https://github.com/jww3"><code>@jww3</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1946">actions/checkout#1946</a></li> </ul> <h2>v4.2.1</h2> <ul> <li>Check out other refs/* by commit if provided, fall back to ref by <a href="https://github.com/orhantoy"><code>@orhantoy</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1924">actions/checkout#1924</a></li> </ul> <h2>v4.2.0</h2> <ul> <li>Add Ref and Commit outputs by <a href="https://github.com/lucacome"><code>@lucacome</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1180">actions/checkout#1180</a></li> <li>Dependency updates by <a href="https://github.com/dependabot"><code>@dependabot</code></a>- <a href="https://redirect.github.com/actions/checkout/pull/1777">actions/checkout#1777</a>, <a href="https://redirect.github.com/actions/checkout/pull/1872">actions/checkout#1872</a></li> </ul> <h2>v4.1.7</h2> <ul> <li>Bump the minor-npm-dependencies group across 1 directory with 4 updates by <a href="https://github.com/dependabot"><code>@dependabot</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1739">actions/checkout#1739</a></li> <li>Bump actions/checkout from 3 to 4 by <a href="https://github.com/dependabot"><code>@dependabot</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1697">actions/checkout#1697</a></li> <li>Check out other refs/* by commit by <a href="https://github.com/orhantoy"><code>@orhantoy</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1774">actions/checkout#1774</a></li> <li>Pin actions/checkout's own workflows to a known, good, stable version. by <a href="https://github.com/jww3"><code>@jww3</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1776">actions/checkout#1776</a></li> </ul> <h2>v4.1.6</h2> <ul> <li>Check platform to set archive extension appropriately by <a href="https://github.com/cory-miller"><code>@cory-miller</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1732">actions/checkout#1732</a></li> </ul> <h2>v4.1.5</h2> <ul> <li>Update NPM dependencies by <a href="https://github.com/cory-miller"><code>@cory-miller</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1703">actions/checkout#1703</a></li> <li>Bump github/codeql-action from 2 to 3 by <a href="https://github.com/dependabot"><code>@dependabot</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1694">actions/checkout#1694</a></li> <li>Bump actions/setup-node from 1 to 4 by <a href="https://github.com/dependabot"><code>@dependabot</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1696">actions/checkout#1696</a></li> <li>Bump actions/upload-artifact from 2 to 4 by <a href="https://github.com/dependabot"><code>@dependabot</code></a> in <a href="https://redirect.github.com/actions/checkout/pull/1695">actions/checkout#1695</a></li> </ul> <!-- raw HTML omitted --> </blockquote> <p>... 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…il.com> I, Mohammad Amanour Rahman <[email protected]>, hereby add my Signed-off-by to this commit. Signed-off-by: Mohammad Amanour Rahman <[email protected]>
…il.com> I, Mohammad Amanour Rahman <[email protected]>, hereby add my Signed-off-by to this commit. Signed-off-by: Mohammad Amanour Rahman <[email protected]>
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…il.com> I, Mohammad Amanour Rahman <[email protected]>, hereby add my Signed-off-by to this commit: 7ce29a1 Signed-off-by: Mohammad Amanour Rahman <[email protected]>
…il.com> I, Mohammad Amanour Rahman <[email protected]>, hereby add my Signed-off-by to this commit: cc0c951 Signed-off-by: Mohammad Amanour Rahman <[email protected]>
Signed-off-by: Mohammad Amanour Rahman <[email protected]>
…il.com> I, Mohammad Amanour Rahman <[email protected]>, hereby add my Signed-off-by to this commit: 7ce29a1 Signed-off-by: Mohammad Amanour Rahman <[email protected]>
…il.com> I, Mohammad Amanour Rahman <[email protected]>, hereby add my Signed-off-by to this commit: cc0c951 Signed-off-by: Mohammad Amanour Rahman <[email protected]>
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Signed-off-by: Mohammad Amanour Rahman <[email protected]>
Signed-off-by: Mohammad Amanour Rahman <[email protected]>
DCO Remediation Commit for Mohammad Amanour Rahman <[email protected]> I, Mohammad Amanour Rahman <[email protected]>, hereby add my Signed-off-by to the previous commits. Signed-off-by: Mohammad Amanour Rahman <[email protected]>
…7980 Signed-off-by: Mohammad Amanour Rahman <[email protected]>
Signed-off-by: Mohammad Amanour Rahman <[email protected]>
Signed-off-by: Mohammad Amanour Rahman <[email protected]>
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2 participants
Fixes # .
Description
This pull request fixes incorrect formatting and clarifies the documentation
for the
network_typeargument inPerceptualLoss.The docstring now correctly reflects the supported network options
and matches the actual implementation.
Types of changes
./runtests.sh -f -u --net --coverage../runtests.sh --quick --unittests --disttests.make htmlcommand in thedocs/folder.No functional behavior is changed.