Prepare OpenHCS 0.6.3 release

Author: trissim

docs/source/development/mcp_release.rst

@@ -16,7 +16,7 @@ the install-surface projections:
 
 .. code-block:: bash
 
-   RELEASE_VERSION=0.6.2
+   RELEASE_VERSION=0.6.3
    python scripts/sync_mcp_release_metadata.py
    python scripts/sync_mcp_release_metadata.py --check
    python scripts/sync_mcp_release_metadata.py --check --expected-version "$RELEASE_VERSION"

openhcs/__init__.py

@@ -14,7 +14,7 @@
 
 from openhcs._source_dependencies import ensure_source_checkout_external_paths
 
-__version__ = "0.6.2"
+__version__ = "0.6.3"
 
 # Configure polystore defaults for OpenHCS integration
 os.environ.setdefault("POLYSTORE_METADATA_FILENAME", "openhcs_metadata.json")

packaging/codex/openhcs/.codex-plugin/plugin.json

@@ -1,6 +1,6 @@
 {
   "name": "openhcs",
-  "version": "0.6.2",
+  "version": "0.6.3",
   "description": "Inspect, author, validate, and run OpenHCS microscopy workflows through the local OpenHCS MCP server.",
   "author": {
     "name": "OpenHCSDev",

packaging/codex/openhcs/.mcp.json

@@ -4,7 +4,7 @@
       "command": "uvx",
       "args": [
         "--from",
-        "openhcs[gui,mcp]==0.6.2",
+        "openhcs[gui,mcp]==0.6.3",
         "openhcs-mcp"
       ]
     }

packaging/installers/README.md

@@ -83,7 +83,7 @@ From the repository environment:
 ```bash
 python -m pytest -q tests/installer
 python scripts/render_installer_contract.py \
-  --version 0.6.2 \
+  --version 0.6.3 \
   --output /tmp/openhcs-installer-contract.json
 ```
 

packaging/mcpb/openhcs/manifest.json

@@ -2,7 +2,7 @@
   "manifest_version": "0.4",
   "name": "openhcs",
   "display_name": "OpenHCS",
-  "version": "0.6.2",
+  "version": "0.6.3",
   "description": "Operate local OpenHCS microscopy workflows through MCP.",
   "long_description": "Installs a pinned OpenHCS environment with the MCP server and PyQt user interface. The MCP process runs over stdio and attaches to an authenticated, separately running OpenHCS UI when GUI tools are requested.",
   "author": {

packaging/mcpb/openhcs/pyproject.toml

@@ -1,8 +1,8 @@
 [project]
 name = "openhcs-mcpb-runtime"
-version = "0.6.2"
+version = "0.6.3"
 description = "Managed runtime for the OpenHCS MCP Bundle"
 requires-python = ">=3.11,<3.14"
 dependencies = [
-    "openhcs[gui,mcp]==0.6.2",
+    "openhcs[gui,mcp]==0.6.3",
 ]

server.json

@@ -8,19 +8,19 @@
     "url": "https://github.com/OpenHCSDev/OpenHCS",
     "source": "github"
   },
-  "version": "0.6.2",
+  "version": "0.6.3",
   "packages": [
     {
       "registryType": "pypi",
       "registryBaseUrl": "https://pypi.org",
       "identifier": "openhcs",
-      "version": "0.6.2",
+      "version": "0.6.3",
       "runtimeHint": "uvx",
       "runtimeArguments": [
         {
           "type": "named",
           "name": "--with",
-          "value": "openhcs[gui,mcp]==0.6.2",
+          "value": "openhcs[gui,mcp]==0.6.3",
           "description": "Install the matching OpenHCS GUI and MCP dependencies."
         }
       ],