conda_cron #1221
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| name: "conda_cron" | |
| on: | |
| # Allow for manual trigger of workflow | |
| workflow_dispatch: | |
| schedule: | |
| # At 07:00 UTC every day | |
| - cron: "0 7 * * *" | |
| concurrency: | |
| group: "${{ github.workflow }}-${{ github.ref }}" | |
| cancel-in-progress: true | |
| defaults: | |
| run: | |
| shell: bash -leo pipefail {0} | |
| jobs: | |
| condacheck: | |
| runs-on: ${{ matrix.OS }} | |
| name: "daily conda check" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ['ubuntu-latest', 'macos-latest'] | |
| python-version: | |
| - "3.11" | |
| - "3.12" | |
| - "3.13" | |
| steps: | |
| - name: Checkout Code | |
| uses: actions/checkout@v6 | |
| with: | |
| fetch-depth: 0 | |
| path: gufe_repo | |
| - name: Get Latest Version | |
| id: latest-version | |
| working-directory: gufe_repo | |
| run: | | |
| REPO="${{ github.repository }}" | |
| VERSION=$(curl -s -H "Authorization: Bearer ${{ secrets.GITHUB_TOKEN }}" \ | |
| "https://api.github.com/repos/$REPO/releases/latest" | jq -r '.tag_name | ltrimstr("v")') | |
| echo $VERSION | |
| echo "VERSION=$VERSION" >> $GITHUB_OUTPUT | |
| - name: setup micromamba | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-name: gufe | |
| cache-environment: true | |
| cache-downloads: true | |
| create-args: >- | |
| python=${{ matrix.python-version }} | |
| gufe=${{ steps.latest-version.outputs.VERSION }} | |
| pooch | |
| pytest | |
| pytest-xdist | |
| pygithub | |
| condarc: | | |
| channels: | |
| - conda-forge | |
| init-shell: bash | |
| - name: Cache Pooch data | |
| uses: actions/cache@v5 | |
| with: | |
| path: | | |
| # linux cache location | |
| ~/.cache/gufe | |
| # osx cache location | |
| ~/Library/Caches/gufe | |
| # When files are added or changed in a pooch registry | |
| # bump this key to create a new cache, for example if | |
| # the key is pooch-${{ matrix.os }}-1 change it to pooch-${{ matrix.os }}-2 | |
| key: pooch-${{ matrix.os }}-0 | |
| - id: run-tests | |
| name: run tests | |
| run: | | |
| python -c 'import gufe;print(gufe.__version__)' | |
| pytest -n auto --pyargs gufe | |
| - name: raise-or-close-issue | |
| if: ${{ always() }} | |
| working-directory: gufe_repo | |
| env: | |
| CI_OUTCOME: ${{ steps.run-tests.outcome }} | |
| TITLE: "[CI] CONDA CRON FAILURE ${{ matrix.os }} python ${{ matrix.python-version }}" | |
| GITHUB_TOKEN: ${{ github.token }} | |
| run: python devtools/raise-or-close-issue.py |