refactor: Update default port from 3000 to 8888 across multiple files

Author: Andre Lanrezac

example_tool/src/main.cpp

@@ -17,13 +17,13 @@ void usage()
 	cout<<"mddriverconstraint"<<endl;
 	cout<<"\tOptions : "<<endl;
 	cout<<"\t\t[-host hostname] : default = localhost"<<endl;
-	cout<<"\t\t[-port port] : default = 3000"<<endl;
+	cout<<"\t\t[-port port] : default = 8888"<<endl;
 	exit(1);
 	}
 
 int main( int argc, char *argv[] )
 	{
-	unsigned port=3000;
+	unsigned port=8888;
 	char hostname[HOSTMAXSIZE]="localhost";
 	unsigned minimaloptionok=false;
 

protocol/doc/html/mddriver.html

@@ -103,7 +103,7 @@ <h2>Testing MDDriver</h2>
   MDDriver &gt; ---- Entering in iimd_init
 </code></pre>
 
-<p>Don't worry, it could be due to a port problem. Try to fix the problem (e.g. the hostname must be "localhost" and the port 3000) in changing the port and hostname in the file: mddriver/src/clienttest.c by the hostname and port obtained when launching ./servertest.</p>
+<p>Don't worry, it could be due to a port problem. Try to fix the problem (e.g. the hostname must be "localhost" and the port 8888) in changing the port and hostname in the file: mddriver/src/clienttest.c by the hostname and port obtained when launching ./servertest.</p>
 
 <h2>Installing <a href="http://www.gromacs.org" title="http://www.gromacs.org">GROMACS</a> with MDDriver support:</h2>
 
@@ -239,7 +239,7 @@ <h2>Lauching the simulation:</h2>
 </code></pre></li>
 <li><p>Then you can run the simulation, providing Gromacs with parameters for MDDriver. The parameter IMDfreq is the number of timesteps between two MDDriver exchanges. When IMDwait is set to 1 this means that the simulation will wait for a client connection before starting, The parameter IMDport is the port on which data wil be sent and IMDmsg sets the log level, from 0 for no messages to 3 for verbose logging (be careful to use the mdrun executable compiled with MDDriver).</p>
 
-<pre><code>mdrun -IMDfreq 1 -IMDwait 1 -IMDport 3000 -IMDmsg 1 -s model.tpr -x output/imd -deffnm output/imd
+<pre><code>mdrun -IMDfreq 1 -IMDwait 1 -IMDport 8888 -IMDmsg 1 -s model.tpr -x output/imd -deffnm output/imd
 </code></pre>
 
 <p>If you use an MPI version of Gromacs/MDDriver, pay attention to execute Gromacs with the same MPI version as it was compiled with!</p></li>

protocol/doc/markdown/mddriver_markdown.txt

@@ -92,7 +92,7 @@ NB: You could have the following error message when you launch the clienttest sc
       MDDriver > ---- Leaving     iimd_probeconnection
       MDDriver > ---- Entering in iimd_init
 
-Don't worry, it could be due to a port problem. Try to fix the problem (e.g. the hostname must be "localhost" and the port 3000) in changing the port and hostname in the file: mddriver/src/clienttest.c by the hostname and port obtained when launching ./servertest.
+Don't worry, it could be due to a port problem. Try to fix the problem (e.g. the hostname must be "localhost" and the port 8888) in changing the port and hostname in the file: mddriver/src/clienttest.c by the hostname and port obtained when launching ./servertest.
 
 
 Installing [GROMACS][gmx] with MDDriver support:
@@ -212,7 +212,7 @@ Lauching the simulation:
 
 4. Then you can run the simulation, providing Gromacs with parameters for MDDriver. The parameter IMDfreq is the number of timesteps between two MDDriver exchanges. When IMDwait is set to 1 this means that the simulation will wait for a client connection before starting, The parameter IMDport is the port on which data wil be sent and IMDmsg sets the log level, from 0 for no messages to 3 for verbose logging (be careful to use the mdrun executable compiled with MDDriver).
 
-        mdrun -IMDfreq 1 -IMDwait 1 -IMDport 3000 -IMDmsg 1 -s model.tpr -x output/imd -deffnm output/imd
+        mdrun -IMDfreq 1 -IMDwait 1 -IMDport 8888 -IMDmsg 1 -s model.tpr -x output/imd -deffnm output/imd
 
   If you use an MPI version of Gromacs/MDDriver, pay attention to execute Gromacs with the same MPI version as it was compiled with!
 

protocol/python/mddriver0.1/mddriver/mddriver.c

@@ -30,7 +30,7 @@ static PyObject * mddriver_client(PyObject *self, PyObject *args)
 	char * filename;
 	int mode=0;
 	int wait=0;
-	int port=3000;
+	int port=8888;
 	int message=0;
 	char * hostname;
 	if (!PyArg_ParseTuple(args, "siis:mddriver_client", &hostname, &port, &message, &filename))
@@ -47,7 +47,7 @@ static PyObject * mddriver_server(PyObject *self, PyObject *args)
 	char * filename;
 	int mode=1;
 	int wait=0;
-	int port=3000;
+	int port=8888;
 	int message=0;
 	if (!PyArg_ParseTuple(args, "iiis:mddriver_server",&port,&wait,&message,&filename))
 		{

protocol/python/mddriverclient.py

@@ -2,7 +2,7 @@
 from time import *
 
 clienthostname="127.0.0.1"
-port=3000
+port=8888
 message=2
 wait=0
 filenameclient="client.log"

protocol/python/mddriverserver.py

@@ -2,7 +2,7 @@
 from time import *
 from mddriver import *
 
-port=3000
+port=8888
 message=2
 wait=1
 filenameserver="server.log"

protocol/src/imd_interface.c

@@ -102,7 +102,7 @@ static int IMDwait = 0;
 static imd_int32 IMDignore = 0;
 
 // Connection port number
-static imd_int32 IMDport = 3000 ;
+static imd_int32 IMDport = 8888 ;
 
 // Message level
 //   0 -> Only error messages
@@ -833,7 +833,7 @@ FILE *IIMD_init( const char  *hostname,     imd_int32   *mode,  imd_int32   *IMD
 		if ( IMDport  <= 1024 )
 		{
 			fprintf(IMDlog, "MDDriver >      Bad port number (using %d) \n", IMDport);
-			IMDport = 3000;
+			IMDport = 8888;
 		}
 
 		int newport = find_free_port(sock, hostname, IMDport);

protocol/test_exe/clienttest.c

@@ -91,7 +91,7 @@ typedef float t_coord[3];
 
 FILE *IMDlog;
 char IMDhostname[] = "localhost";
-int IMDport   = 3000;
+int IMDport   = 8888;
 int IMDmsg = 2;
 int IMDwait   = 0;                     // Connection configuration
 int IMDmode = 0; // 0 : client , 1 : server

protocol/test_exe/protocoltest.c

@@ -92,7 +92,7 @@ static       IMDGrid grid; // Communication buffer for energies
 
 int nstximd              = 0;
 int myimd_wait           = 1;
-int myimd_port           = -3000; // If the value is negative, we will print debug output!
+int myimd_port           = -8888; // If the value is negative, we will print debug output!
 
 void myimd_init( )
 {	// --- MDD Initialization function ---

protocol/test_exe/servertest.c

@@ -226,7 +226,7 @@ int myimd_wait           = 1;
 int myimd_log           = 2;
 
 // If the value is negative, we will print debug output!
-int myimd_port           = 3000;
+int myimd_port           = 8888;
 
 
 // MDD Initialization function