Ubuntu ApPredict test suite #146
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| name: Ubuntu ApPredict test suite | |
| on: | |
| schedule: | |
| - cron: "0 0 * * *" # every day at midnight. | |
| pull_request: | |
| push: | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| inputs: | |
| chaste_branch: | |
| description: "Chaste branch" | |
| required: false | |
| type: "string" | |
| default: "develop" | |
| jobs: | |
| build-and-test: | |
| runs-on: ubuntu-22.04 | |
| env: | |
| CHASTE_TEST_OUTPUT: ${{ github.workspace }}/chaste-test-dir | |
| chaste_branch: ${{ inputs.chaste_branch || 'develop' }} | |
| steps: | |
| - name: Checkout Chaste/${{ env.chaste_branch }} | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: Chaste/Chaste | |
| path: Chaste | |
| ref: ${{ env.chaste_branch }} | |
| - name: Checkout ApPredict | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: Chaste/ApPredict | |
| path: Chaste/projects/ApPredict | |
| - name: Setup directories | |
| run: | | |
| mkdir -p build | |
| mkdir -p ${CHASTE_TEST_OUTPUT} | |
| - name: Install dependencies | |
| run: | | |
| sudo wget -O /usr/share/keyrings/chaste.asc https://chaste.github.io/chaste.asc | |
| repo="deb [signed-by=/usr/share/keyrings/chaste.asc] https://chaste.github.io/ubuntu jammy/" | |
| echo "${repo}" | sudo tee /etc/apt/sources.list.d/chaste.list | |
| sudo apt-get update | |
| sudo apt-get install -y chaste-dependencies | |
| - name: Configure | |
| run: cmake -DCMAKE_BUILD_TYPE=Release ../Chaste | |
| working-directory: build | |
| - name: Remove cellml | |
| run: rm -rf Chaste/projects/ApPredict/src/cellml/ | |
| - name: Configure again # Checks that missing cellml is fetched (#30, #26) | |
| run: cmake -DCMAKE_BUILD_TYPE=Release ../Chaste | |
| working-directory: build | |
| - name: TestChasteBuildInfo | |
| run: | | |
| cmake --build . --target TestChasteBuildInfo --parallel $(nproc) | |
| ctest -V -R TestChasteBuildInfo$ | |
| working-directory: build | |
| - name: Build ApPredict | |
| run: cmake --build . --target project_ApPredict --parallel $(nproc) | |
| working-directory: build | |
| - name: Run ApPredict test suite | |
| run: ctest -L ApPredict -j $(nproc) --output-on-failure | |
| working-directory: build | |
| - name: Slack notification | |
| if: failure() | |
| uses: slackapi/slack-github-action@v2.0.0 | |
| with: | |
| method: chat.postMessage | |
| token: ${{ secrets.SLACK_NOTIFICATIONS_BOT_TOKEN }} | |
| payload: | | |
| channel: ${{ secrets.SLACK_CHANNEL_ID }} | |
| text: "Chaste/ApPredict\nStatus: ${{ job.status }}\nBranch: ${{ github.event.pull_request.html_url || github.event.head_commit.url }}" | |
| blocks: | |
| - type: "section" | |
| text: | |
| type: "mrkdwn" | |
| text: ":rotating_light: <https://github.com/Chaste/ApPredict|Chaste/ApPredict>\n*Status:* <${{ job.status }}>\n*Branch:* <${{ github.event.pull_request.html_url || github.event.head_commit.url }}>" |