parallax/pyproject.toml at main · AllenNeuralDynamics/parallax · GitHub

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[build-system]
requires = ["setuptools", "setuptools-scm"]
build-backend = "setuptools.build_meta"

[project]
name = "parallax-app"
authors = [
  { name="Hanna Lee", email="hanna.lee@alleninstitute.org" },
]
description = "GUI software for photogrammetry-assisted probe targeting in electrophysiology"
license =  {text = "MIT"}
readme = "README.md"
keywords = ["parallax"]
dynamic = ["version"]
requires-python = "~=3.10"
classifiers = [
    "Programming Language :: Python :: 3"
]

dependencies = [
    "pip",
    "PyQt6>=6.10.0",
    "pyqtgraph",
    "opencv-python",
    "scipy",
    "pandas",
    "scikit-image",
    "requests",
    "scikit-learn",
    "plotly",
    "PyQt6-WebEngine>=6.10.0",
    "aiohttp",
    "pyyaml",
    "SimpleITK",
    "ultralytics>=8.2.0",
    "lap>=0.5.12",
    "torch>=2.3.0",
    "pydantic>=2"
   ]

[tool.setuptools.packages.find]
include = ["parallax", "ui", "img"]
exclude = ["tests", "tests.*"]

[tool.setuptools.package-data]
exclude = ["tests", "tests/*"]

[tool.setuptools.dynamic]
version = {attr = "parallax.__version__"}
readme = {file = "README.md"}

[project.optional-dependencies]
dev = ['parallax-app[linters]']

linters = [
    'codespell',
    'coverage',
    'ruff',
    'interrogate',
    'pytest-mock'
]

docs = [
    'Sphinx',
    'sphinxcontrib-video',
    'sphinx-jinja',
    'furo',
    'docutils'
]

test = [
    "pytest>=7",
    "pytest-qt>=4.4.0",
    "pytest-cov>=4.1.0",
    "pytest-mock>=3.10.0",
    "opencv-python-headless",
]

[tool.coverage.run]
omit = [
    "*__init__*"
]
source = ["parallax"]

[tool.coverage.report]
exclude_lines = ["if __name__ == .__main__.:", "pragma: no cover"]
fail_under = 70

[tool.interrogate]
exclude = ["setup.py", "docs", "build"]
fail-under = 70

[tool.ruff]
line-length = 120
exclude = [
    ".git",
    "__pycache__",
    "docs",
    "tests",
]

[tool.ruff.lint]
# Enable Pyflakes (F), pycodestyle (E, W), and isort (I)
select = ["F", "E", "W", "I"]

[tool.codespell]
skip = ".git,*.json,*.log"

[tool]
homepage = "https://github.com/AllenNeuralDynamics/parallax"
repository = "https://github.com/AllenNeuralDynamics/parallax"
documentation = "https://github.com/AllenNeuralDynamics/parallax/wiki"