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saskiaddbirman
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Feat couplesmallthings (#201)
* neuralynx, remove Hybridication, Custom probe * python files * fix: typo --------- Co-authored-by: Dan Birman <danbirman@gmail.com>
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src/aind_data_schema_models/_generators/models/organizations.csv

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@@ -64,6 +64,7 @@ National Institute of Mental Health,NIMH,ROR,04xeg9z08
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National Institute of Neurological Disorders and Stroke,NINDS,ROR,01s5ya894
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National Instruments,,ROR,026exqw73
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Navitar,,,
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NeuraLynx,,,
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Neurophotometrics,,,
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New Scale Technologies,,,
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New York University,NYU,ROR,0190ak572

src/aind_data_schema_models/_generators/models/specimen_procedure_types.csv

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@@ -7,7 +7,6 @@ Expansion
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Fixation
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Fixation and permeabilization
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Gelation
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Hybridication and amplification
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Hybridization Chain Reaction
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Immunolabeling
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Mounting

src/aind_data_schema_models/devices.py

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@@ -129,6 +129,7 @@ class ProbeModel(str, Enum):
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NP2_SINGLE_SHANK = "Neuropixels 2.0 (Single Shank)"
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NP2_MULTI_SHANK = "Neuropixels 2.0 (Multi Shank)"
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NP2_QUAD_BASE = "Neuropixels 2.0 (Quad Base)"
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CUSTOM = "Custom"
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class DetectorType(str, Enum):

src/aind_data_schema_models/organizations.py

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@@ -655,6 +655,15 @@ class _Navitar(OrganizationModel):
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registry_identifier: None = None
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class _Neuralynx(OrganizationModel):
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"""Model NeuraLynx"""
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name: Literal["NeuraLynx"] = "NeuraLynx"
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abbreviation: Literal[None] = None
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registry: None = None
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registry_identifier: None = None
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class _Neurophotometrics(OrganizationModel):
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"""Model Neurophotometrics"""
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@@ -1043,6 +1052,7 @@ class Organization:
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NINDS = _National_Institute_Of_Neurological_Disorders_And_Stroke()
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NATIONAL_INSTRUMENTS = _National_Instruments()
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NAVITAR = _Navitar()
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NEURALYNX = _Neuralynx()
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NEUROPHOTOMETRICS = _Neurophotometrics()
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NEW_SCALE_TECHNOLOGIES = _New_Scale_Technologies()
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NYU = _New_York_University()

src/aind_data_schema_models/specimen_procedure_types.py

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@@ -14,7 +14,6 @@ class SpecimenProcedureType(str, Enum):
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FIXATION = "Fixation"
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FIXATION_AND_PERMEABILIZATION = "Fixation and permeabilization"
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GELATION = "Gelation"
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HYBRIDICATION_AND_AMPLIFICATION = "Hybridication and amplification"
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HYBRIDIZATION_CHAIN_REACTION = "Hybridization Chain Reaction"
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IMMUNOLABELING = "Immunolabeling"
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MOUNTING = "Mounting"

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